DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SA-2 and psc3

DIOPT Version :9

Sequence 1:NP_612109.3 Gene:SA-2 / 38167 FlyBaseID:FBgn0043865 Length:973 Species:Drosophila melanogaster
Sequence 2:NP_001343016.1 Gene:psc3 / 2542387 PomBaseID:SPAC17H9.20 Length:962 Species:Schizosaccharomyces pombe


Alignment Length:1000 Identity:202/1000 - (20%)
Similarity:345/1000 - (34%) Gaps:339/1000 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 ILSRKRLSPTN---------KRNSHIE-----------------------SVAKYWGEFYLDSPT 87
            |.|:||....|         :||:.:|                       .:|..|...|.....
pombe    50 ISSKKRHPRPNSKGVNVKRSRRNAIVEEDPQEEIFNNLFAFLLDQKVDTMDIAVSWFADYAKDNQ 114

  Fly    88 AALVALLQFVVEVSGSH-----YQIPDDTSMPFSYSDILSNSSSHFSNTHIYPL------IRKPA 141
            :||..|:.|:::..|.:     :.:.|..|...:.|.|  ..|...::|..|||      .|...
pombe   115 SALANLINFILKCCGCNRAINVFDVQDQDSASATLSQI--QLSVERTSTRDYPLNSKNLKFRNFR 177

  Fly   142 DVFVNQVGSFLNALLLVANKFRSDSYQLFLVQLTNFVMACSESNIRTFRHTATMIGLKIMTILSD 206
            ......:.:|::.|.:....:.|..::    .:.::|:|.|.|.:|..|||||:..|.|||.|.:
pombe   178 KRLTGLLSNFVSQLSIRNYLYNSTVFE----DIMSWVVAMSSSTMRPIRHTATVFCLNIMTFLCE 238

  Fly   207 -----------------------------LKSLDDEIAMTVWMQ---------MFNSMFVARSRD 233
                                         :..|::.:...|..|         .|:|:||.|.||
pombe   239 KSKELLNEHAIATKQLEKEEKRSRVNRNRINELNNSLGEIVKQQDTLTTYLNDYFDSVFVHRYRD 303

  Fly   234 IVTDIRLLCISELGQWFARYPHCHLQPTSLRIFYEALNDGSGDVIQCSLDNISVLCRK----DVL 294
            :...||:.|:.|||.|....|......:.||.....|:|.:..|   .|..:.|| ||    |..
pombe   304 VEPKIRVDCLQELGVWINTVPSIFFSGSYLRYLGWMLSDINTTV---RLTVVKVL-RKFFETDSF 364

  Fly   295 FSEIVALTSEFREILVEL-CLGKEDAIAEKSVQFLTHFHVL----SAEILTDDVCRVLEQLIMAA 354
            ...:...:|.|:|.::|: |:..:..:...|::........    ::|||     :|| :||:..
pombe   365 IGGLRHFSSRFKERILEMSCVDADIGVRVASIRLCNAMRTCGFLENSEIL-----KVL-KLILDI 423

  Fly   355 NRGLAQAAADLFILRRNGLDGETFCQRVKHLLQLFIECGHEQADYLVDSLIDN--CELVLDW--K 415
            |..: |..|.||:           |:.|...:...|:...|: ||::.:....  ....:.|  .
pombe   424 NPRV-QREAVLFL-----------CKVVDESVNEKIDLWGEE-DYILKAFSQTSLTTFSVHWIKF 475

  Fly   416 SMIAVLLENPKSRELSDIHCSSLIAILLAGVKQATAGEIPPGRYTKDLKREPRQGAQERATKCLA 480
            |.:..|||..:....|.....:|:.|.     |.....|.|  .|:.|.......:..::.:.::
pombe   476 SQMCKLLEEVRLSYQSSFDYDTLLRIF-----QKNGNFITP--ITQALLNACEIDSIYQSWEDIS 533

  Fly   481 PVLPELLRTYANRLQD-IERLLELPKYFCFDYYHEQNRMGQLNELVEHFELIIFD---------- 534
            ..:  |...|.:.|:| |:.:|.    ||           :||:..|...|.:..          
pombe   534 NFV--LFDNYTSTLKDPIDSILS----FC-----------KLNDFQESILLQLLSASIQTVCNNN 581

  Fly   535 ----------QTSSTTVLQITVKTLEFLNRMIPIPLTKQLLNSAVTNYKMAWHRTQDTSPSRSTH 589
                      |.:.||..|...|.|.:|| ::|      .:||.          |:..|.|.:..
pombe   582 FITPKTVHNKQAAETTNDQNKDKDLLYLN-LLP------YINSI----------TERNSASPTLL 629

  Fly   590 NESNRLLATLRLLTV----LSGHF-----NLSKWDLTE---------PLLF-----------SLK 625
            ::|.|||.::.|..:    ||.||     ||.|:.||.         .:||           .||
pombe   630 HDSLRLLFSMDLTEMTDPQLSRHFELLINNLKKFFLTNNDLQIIQGCTILFLRLDSIPALKEDLK 694

  Fly   626 MLLRQRRLPNGDDLPPEAFSLYLK---------------------ACFCCLCWDMENLEG-TALN 668
            :|:        .|:..:..:.:||                     ||       :..:|| |:|.
pombe   695 LLV--------TDICDQTVTEFLKNFGSFNIQDAVITKDEFVIFEAC-------LTRIEGCTSLK 744

  Fly   669 NVDMDEY--CDVLHHNLEDYLYVTFSLVGKSNTEPLAYPCFSYTCDLFVLHGNLCGSSNPSIRSV 731
              |..:|  .|:::..|...|    |.|..|..:.|.:                           
pombe   745 --DFSDYPEFDIIYERLVSLL----SRVPNSYEDTLKF--------------------------- 776

  Fly   732 AHVPSGNELDILEGFLMEHFLEL-SPSD--------------LMLETNSD-----QLQRIRSILT 776
                  :.::.|:..|...||.. :|:|              |:...|:|     |||..|:.|.
pombe   777 ------SAINTLQSLLFWFFLRKDNPADEEKKKDDETKVFNCLINIMNNDSSKILQLQAARTFLE 835

  Fly   777 -----------------------SYLKVVCLGVVPTMRASKFYEYYVKYHAPFGDVMRCS---ME 815
                                   ::||...|..:..:.....|.|......||..:.:.|   .:
pombe   836 TVIMKEGVKASHYNDDNRVSEEHNFLKPQFLDALLKILEGWLYTYAKVGQFPFKRLTQASSPHTQ 900

  Fly   816 LALQRNPIHFAMTMLHTCLLLYAKV 840
            ::|.:||::..: :.|.|..|.:|:
pombe   901 ISLDKNPLNRRL-LEHVCCDLTSKL 924

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SA-2NP_612109.3 STAG 134..217 CDD:285686 23/117 (20%)
psc3NP_001343016.1 STAG 1..724 CDD:331549 158/751 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5537
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000572
OrthoInspector 1 1.000 - - otm47238
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11199
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.910

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