DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SA-2 and rec11

DIOPT Version :9

Sequence 1:NP_612109.3 Gene:SA-2 / 38167 FlyBaseID:FBgn0043865 Length:973 Species:Drosophila melanogaster
Sequence 2:NP_588108.3 Gene:rec11 / 2538852 PomBaseID:SPCC4E9.01c Length:923 Species:Schizosaccharomyces pombe


Alignment Length:935 Identity:175/935 - (18%)
Similarity:317/935 - (33%) Gaps:325/935 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 SQASNQMDFEIREECSIAPNDEPVCVDGTVGDATNKSLLQMILSRKRLSPTNKR---NSH----- 70
            |.:..:..:..::|.|:..|:|            |..:           .||:.   |||     
pombe    43 SPSEKKRKWGTQDEFSLTENEE------------NNEI-----------ETNEEMHVNSHDYAFP 84

  Fly    71 -------------IESVAKYWGEFYLDSPTAALVALLQFVVEVSG-----SHYQIPDDTSMP--- 114
                         :|.:::::.|.|..:....::..:.|.:..||     :::.:.|..|:|   
pombe    85 QEFFLKLLDIDMPLEQLSQHYFEDYKSNSADFMLTFINFALVASGCQPFVTNFDVQDVDSIPETL 149

  Fly   115 ------------FSYSDILSNSSSHFSNTHIYPLIRKPADVFVNQVGSFLNALLLVANKFRSDSY 167
                        .:|:|.|..|:|..:.|     :|....:|:.:   |::. :.|.:.|..|| 
pombe   150 SQVNRSSFQKSSCAYTDYLYTSNSKEAKT-----VRIRFQLFLVE---FISK-VYVEDAFLGDS- 204

  Fly   168 QLFLVQLTNFVMACSESNIRTFRHTATMIGLKIM----TILSDLKSLDDEIAMTVWMQMFNSMFV 228
              |:.....::...:.|.....|||||.|...||    .|::.|....::.|..:.::...|.|:
pombe   205 --FMETTKAWIFTMTTSPWMLVRHTATTICCDIMRCLCLIVNKLSEKSNQTAEILVLRDLTSRFI 267

  Fly   229 ------------ARSRDIVTDIRLLCISELGQWFARYPHCHLQPTSL------RIFYEALNDGSG 275
                        :|..||...||::|::.|      |..|.|.||.|      |.....|:|...
pombe   268 DMIHDICDSVLFSRIHDIRASIRIVCVTAL------YDCCQLLPTYLINRNLIRHSGWGLSDAES 326

  Fly   276 DVIQCSLDNISVLC----RKDVLFSEIVALTSEFREILVELCLGKEDAI-------AEKSVQFLT 329
            .:.:.||..|..|.    .||..|  :|.....|...:||:|....|::       .||.::.::
pombe   327 QIRKISLKIIDYLSSHEPEKDQDF--VVDFLDRFSLRIVEICRYDIDSVRSVALKTCEKLMEKIS 389

  Fly   330 -----------------------------------HFHVLSAEILTDDVCRVLEQ----LIMAAN 355
                                               :.:...|:..|..:.::|.:    |::::.
pombe   390 LNGKCINIVSSCIFDGKPQNRISTMRILVAHTNERYANYCEAKTATISLSKLLRREKIPLLVSSF 454

  Fly   356 RGLAQAAADLFILRRNGLD------GETFCQRVK---------------------------HLLQ 387
            ..|.:..|.||||.: |.:      .:....|||                           |..|
pombe   455 ESLFKMNALLFILEQ-GFESWFRDSSDHIFSRVKDDDKFVYQSQENNFYDADFIREYDMNNHRQQ 518

  Fly   388 LFIECGHEQADYLVDSLIDNCELVLDWKSMIAVLLE------------NPKSRELSDIHCSSLIA 440
            |..|..|        |:..|.:|:..|:.:..:||.            ||.....:.|..||:..
pombe   519 LIEESMH--------SIHTNSQLLASWEDVAKLLLYDRFDAKDTNSVLNPCIPSNAVIEFSSIYL 575

  Fly   441 ILLAGVKQATAGEIPPGRYTKDLKREPRQGAQERATKCLAPVLPELLRTYANRLQDIERLLELPK 505
            ...|               |...||..:.|.:         :..|::......|:::..||:..:
pombe   576 HYFA---------------THISKRSKKPGKR---------LEDEVVNQQQAMLRNLPLLLQKYR 616

  Fly   506 YFCFDYYHEQNRMGQL-------NELVEHFELI---IFDQTSSTTVLQITVKTLEFLNRMIPIPL 560
            ..|...|.....:.|:       .|..:.|..:   |.|..:||||..:.:....|.:|:     
pombe   617 ESCVSSYFFIKCVEQIPDELLYKREFHKDFSKLYKEILDIFNSTTVNFLMILCSRFFHRL----- 676

  Fly   561 TKQLLNSAVTNYKMAWHRTQDTSPSRSTHNESNRLLATLRLLTVLSGHFNLSKWDLTEPLLFSLK 625
               .:|..|         .:|                   :|..:...:|    ||.|.|...|.
pombe   677 ---AVNKVV---------QED-------------------ILFAIDNVYN----DLAESLHEQLN 706

  Fly   626 MLLRQRRLP-----NGDDLPPEAFSLYLKA-CFCCLCWDMENLEGTALNNVDMDE-YCDVLHHNL 683
            ..::::::.     ||:|   |..:|.|.. .|.|...:|..|......|:.:.| .|::.  :|
pombe   707 AYIQRKKINKKNQLNGND---ETQNLVLALNKFGCFAKEMVCLRDVNDWNIKLSEKLCEIC--SL 766

  Fly   684 EDYLYVTFSLVGKSNTEPLAYPCFSYTCDLFVL-----HGNLCGSSNPSIRS--VAHVPSGNELD 741
            |         ||     |:.  |:|....||:|     ....|..:|..:::  ||...:||   
pombe   767 E---------VG-----PIV--CYSSLKVLFLLLLSDMRDRNCIFTNIFLKAAKVAKQKNGN--- 812

  Fly   742 ILEGFLMEHFLELSPSDLMLETNSD 766
               .||.:.|:.::...|.|.:.::
pombe   813 ---SFLSKVFITITMLTLFLGSKAN 834

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SA-2NP_612109.3 STAG 134..217 CDD:285686 20/86 (23%)
rec11NP_588108.3 IRR1 2..766 CDD:227824 154/843 (18%)
STAG 165..253 CDD:285686 24/99 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5537
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000572
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11199
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.000

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