DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SA-2 and STAG2

DIOPT Version :9

Sequence 1:NP_612109.3 Gene:SA-2 / 38167 FlyBaseID:FBgn0043865 Length:973 Species:Drosophila melanogaster
Sequence 2:NP_001036214.1 Gene:STAG2 / 10735 HGNCID:11355 Length:1268 Species:Homo sapiens


Alignment Length:1096 Identity:270/1096 - (24%)
Similarity:468/1096 - (42%) Gaps:190/1096 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DISFDDAVLNDSQA--SNQMDFEIREECSIAPNDEPVCVDGTVGDAT-----NKSLLQMILSRKR 60
            :|..|..:|.:|:.  |:..|||..|..:........|..|..|.|.     |.       ..|.
Human     6 EIPTDFNLLQESETHFSSDTDFEDIEGKNQKQGKGKTCKKGKKGPAEKGKGGNG-------GGKP 63

  Fly    61 LSPTNKRNSH---------------------IESVAKYWGEFYLDSPTAALVALLQFVVEVSGSH 104
            .|..|:.|.|                     ::||...|.|.|......||:.|:.|.::.||..
Human    64 PSGPNRMNGHHQQNGVENMMLFEVVKMGKSAMQSVVDDWIESYKHDRDIALLDLINFFIQCSGCK 128

  Fly   105 YQIPDDTSMPFSYSDILSNSSSHF-SNTHIYPLI------RKPADVFVNQVGSFLNALLLVANKF 162
            ..:..:.......|:|:...:..| .::..|||.      :|....|...:|      :||....
Human   129 GVVTAEMFRHMQNSEIIRKMTEEFDEDSGDYPLTMAGPQWKKFKSSFCEFIG------VLVRQCQ 187

  Fly   163 RSDSYQLFLVQ-LTNFVMACSESNIRTFRHTATMIGLKIMTIL---------------------- 204
            .|..|..:::. :.:.:...|:|.:|.||||:|:..:|:||.|                      
Human   188 YSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSINMDNTQRQYEAER 252

  Fly   205 -------------------SDLKSLDDEIAMTVWMQMFNSMFVARSRDIVTDIRLLCISELGQWF 250
                               .:|:...|||. .:...:|..:||.|.||.:.:||.:||.|:|.|.
Human   253 NKMIGKRANERLELLLQKRKELQENQDEIE-NMMNAIFKGVFVHRYRDAIAEIRAICIEEIGIWM 316

  Fly   251 ARYPHCHLQPTSLRIFYEALNDGSGDV-IQCSLDNISVLCRKDVLFSEIVALTSEFREILVELCL 314
            ..|....|..:.|:.....::|..|:| ::| |..:..|.....|.|::...||.|::.:|.:.|
Human   317 KMYSDAFLNDSYLKYVGWTMHDKQGEVRLKC-LTALQGLYYNKELNSKLELFTSRFKDRIVSMTL 380

  Fly   315 GKEDAIAEKSVQFLTHFHVLSAEILTDDVCRVLEQLIMAANRGLAQAAAD-----LF-------- 366
            .||..:|.::::.||.....|.|:||.:.|..:..|:.:|:|.:|.||.:     ||        
Human   381 DKEYDVAVQAIKLLTLVLQSSEEVLTAEDCENVYHLVYSAHRPVAVAAGEFLYKKLFSRRDPEED 445

  Fly   367 -ILRRNGLDGETFCQRVKHLLQLFIECG-HEQADYLVDSLIDNC--ELVLDWKSMIAVLLENPKS 427
             :::|.|..|.. ...||.|:..|:|.. ||.|.|||||:.| |  ||:.||:.|.::|||.|.|
Human   446 GMMKRRGRQGPN-ANLVKTLVFFFLESELHEHAAYLVDSMWD-CATELLKDWECMNSLLLEEPLS 508

  Fly   428 RE--LSDIHCSSLIAILLAGVKQATAGEIPPGRYTKD---LKREPRQGAQERA--TKCLAPVLPE 485
            .|  |:|...|:||.|:|..::||.....|.||.|..   ..:|.:....:|.  |:..|..||:
Human   509 GEEALTDRQESALIEIMLCTIRQAAECHPPVGRGTGKRVLTAKEKKTQLDDRTKITELFAVALPQ 573

  Fly   486 LLRTYANRLQDIERLLELPKYFCFDYYHEQNRMGQLNELVEHFELIIFDQTSSTTVLQITVKTLE 550
            ||..|:...:.:..||:||:||..:.|........|:.|:.....|: ::.:.|.||:...||..
Human   574 LLAKYSVDAEKVTNLLQLPQYFDLEIYTTGRLEKHLDALLRQIRNIV-EKHTDTDVLEACSKTYH 637

  Fly   551 FL--------NRMIPIPLTK-QLLNSAVTNYKMAWHRTQD--TSPSRSTHNESNRLLATLRLLTV 604
            .|        ||   :.::: ||::.....:.   ...:|  ........:::.::|:||:.:|.
Human   638 ALCNEEFTIFNR---VDISRSQLIDELADKFN---RLLEDFLQEGEEPDEDDAYQVLSTLKRITA 696

  Fly   605 LSGHFNLSKWDLTEPLLFSLKMLLRQRRLPNGDDLPPEAFSLYLKAC-FCCLCWDMENLEGTALN 668
            .....:|||||     ||:....|.:..:.|||  .||...::...| ...:.|.:..:..::..
Human   697 FHNAHDLSKWD-----LFACNYKLLKTGIENGD--MPEQIVIHALQCTHYVILWQLAKITESSST 754

  Fly   669 NVD-------MDEYCDVLHHNLEDYLYVTFSLVGKSNTEPLAYPCFSYTCDLFVLHGN-LCGSSN 725
            ..|       |..:|.:..|      |:|     ..|| .:....|:..||:.::..: :.....
Human   755 KEDLLRLKKQMRVFCQICQH------YLT-----NVNT-TVKEQAFTILCDILMIFSHQIMSGGR 807

  Fly   726 PSIRSVAHVPSGNELDILEGFLMEH-FLEL----SPSDLMLETNSDQLQRI---RSILTSYLKVV 782
            ..:..:.:.|..:....|..|:::| |:|.    :.:|...|..:.:::.:   |::|.::.|::
Human   808 DMLEPLVYTPDSSLQSELLSFILDHVFIEQDDDNNSADGQQEDEASKIEALHKRRNLLAAFCKLI 872

  Fly   783 CLGVVPTMRASKFYEYYVKYHAPFGDVMRCSMELALQRNPIHFAMTMLHTCLLLYAKVFPDDTRH 847
            ...||....|:..::.|:||:..:||:::.:|....|.:.|..|.|::.:...|:.::..::   
Human   873 VYTVVEMNTAADIFKQYMKYYNDYGDIIKETMSKTRQIDKIQCAKTLILSLQQLFNEMIQEN--- 934

  Fly   848 AAGQRALRPAE-FSELMELANRLAKILISNPMEHRECVIALHRSGILFVFELAQKQPTEATKKLP 911
              |....|.:. ||.:.|||.|.|.....:.::.||.:..||:.||.|.|    |:|....:..|
Human   935 --GYNFDRSSSTFSGIKELARRFALTFGLDQLKTREAIAMLHKDGIEFAF----KEPNPQGESHP 993

  Fly   912 -----FLRVLKVFVPLLLVQDKTRILNFFEPYEQLIIPTCNRNDI-AHLKEYRNAL 961
                 ||.:|..|...||.|||..:..:.|.:....: :..|.|: ..|..|||:|
Human   994 PLNLAFLDILSEFSSKLLRQDKRTVYVYLEKFMTFQM-SLRREDVWLPLMSYRNSL 1048

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SA-2NP_612109.3 STAG 134..217 CDD:285686 26/130 (20%)
STAG2NP_001036214.1 STAG 157..265 CDD:400698 22/113 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165159467
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5537
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG60131
OrthoDB 1 1.010 - - D167826at2759
OrthoFinder 1 1.000 - - FOG0000572
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11199
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
87.820

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