DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SA-2 and si:ch211-269e2.1

DIOPT Version :9

Sequence 1:NP_612109.3 Gene:SA-2 / 38167 FlyBaseID:FBgn0043865 Length:973 Species:Drosophila melanogaster
Sequence 2:XP_017213324.1 Gene:si:ch211-269e2.1 / 100537961 ZFINID:ZDB-GENE-070912-267 Length:1174 Species:Danio rerio


Alignment Length:1083 Identity:247/1083 - (22%)
Similarity:441/1083 - (40%) Gaps:226/1083 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 ECS-IAPNDEPVCVDGTVGDATNKSLLQMILSRKRLSPTNKRNSHIESVAKY------------- 77
            ||| .|........:|::|.|.|:.|               :|..:|:|..:             
Zfish    50 ECSENAKRKHSKSSNGSLGRAENEQL---------------KNGDVEAVTLFEVVSMGRNAMQAV 99

  Fly    78 ---WGEFYLDSPTAALVALLQFVVEVSGSHYQIPDDTSMPFSYSDILS--------NSSSHFSNT 131
               |.:.|......||:.|:.|.::.||....:..:.......:|::|        ::...:...
Zfish   100 VDDWIDAYTVDRDTALLDLISFFIQCSGCKGMVTAEMFQSKQGTDVMSKMVEDLDEDAGFQYKKF 164

  Fly   132 HIYPLIRK---PADVFVNQVGSFLNALLLVANKFRS-------------------DSYQLFLVQL 174
            ..:|.|..   |.|:...:....::.|..  .:|||                   |.|  .|..|
Zfish   165 LAFPWILTVTWPLDMDSGEYPLIMSGLYW--KRFRSHFCEFISVLVAQCQSCVIFDGY--LLNTL 225

  Fly   175 TNFVMACSESNIRTFRHTATMIGLKIMTILSDLK-----SLDD-------EIAM----------- 216
            .:.:...|:|.:|.||||.|:..:|:::.|.::.     |:|:       |:|.           
Zfish   226 ISLLTELSDSRVRAFRHTCTLAAVKLLSALVNVALNLSVSVDNSQRLYEVELAKMASKRASPRLD 290

  Fly   217 -----------------TVWMQMFNSMFVARSRDIVTDIRLLCISELGQWFARYPHCHLQPTSLR 264
                             .:...:|..:|:.|.||::.:||.:|:.||..|...|....|..:.|:
Zfish   291 RIQRKISELQDRKLEIENMMDAIFKGVFLKRYRDVIPEIRSICMEELTVWMKLYSSVFLNDSYLK 355

  Fly   265 IFYEALNDGSGDV-IQCSLDNISVLCRKDVLFSEIVALTSEFREILVELCLGKEDAIAEKSVQFL 328
            .....::|...|| ::|.|....:.  :|...|::...|..|:|.::.:.|.|:..:|.::|:.|
Zfish   356 YVGWMMHDKQPDVRLKCVLGLQGLY--QDQNSSKMDLFTVRFKERMISMTLDKDHEVAIQAVRLL 418

  Fly   329 THFHVLSAEILTDDVCRVLEQLIMAANRGLAQAAADLFILR----------RNGLDG-----ETF 378
            ........::|:.|..:.:.|.:..::|.||..|......|          |||...     |..
Zfish   419 MVISQSCEDVLSPDDHKNVLQFVYCSHRPLATTAGQFLYNRLLSNPELSTTRNGGSNQDRHRELV 483

  Fly   379 CQRVKHLLQLFIECG-HEQADYLVDSLIDN-CELVLDWKSMIAVLLENPKSRE--LSDIHCSSLI 439
            ..:|:.|:....|.. |:...||||||.|: ..|:.||..:.::||.:...::  ||....:.:|
Zfish   484 LAKVRALINFHTESKLHQHVLYLVDSLWDSGGALLKDWTGLTSLLLPHTSCQDQALSSAEEAFVI 548

  Fly   440 AILLAGVKQATAGEIPP--GR-------YTKDLKREPRQGAQERATKCLAPVLPELLRTYANRLQ 495
            .:::|.|:||..|  ||  ||       .||:.|.:....|  :.|:.....||.||..|:...:
Zfish   549 ELMVASVRQAAEG--PPLSGRGAGKKVISTKEKKLQTDDCA--KLTEHFIKALPGLLSKYSEDAE 609

  Fly   496 DIERLLELPKYFCFDYYHEQNRMGQLNELVE-------HFELIIFDQTSSTTVLQITVKTLEFLN 553
            .:...|.:|:||..|....:|....|..|.|       |.::::. :||:.:...:..:...|  
Zfish   610 KLTSFLRIPRYFQMDTCDPENSQCVLALLAELETAVNRHTDVVLL-ETSARSYQSLCAQDSAF-- 671

  Fly   554 RMIPIPLTKQLLNSAVTNYKMAWHRTQDTSPSRS------THNESN--RLLATLRLLTVLSGHFN 610
            ..:..|...||:..        |..|..|..:.|      |:||.|  .:|:||:.|...:...:
Zfish   672 HSLARPAFDQLIQH--------WTNTLGTRLAESLSDDCFTYNEDNVLEILSTLKKLAAFNIAQD 728

  Fly   611 LSKWDLTEPLLFSLKMLLRQRRLPNGDDLPPEAFSLYLKACFC-CLCWDMENLEGTALNNVD--- 671
            ||||.     |:.|...|.:..|.:| .||.|. ::....|.| |:.|.: |..|..|.:.:   
Zfish   729 LSKWS-----LYELVTKLLEGELKHG-GLPVEV-TIEALRCMCSCILWKL-NTFGEGLTSRESAL 785

  Fly   672 -----MDEYCDVLHHNLEDYLYVTFSLVGKSNTEPL----AYPCFSYTCDLFVLHG---NLCGSS 724
                 :..:|:..|..|             |:.|.|    |:.|.|   |:.:.|.   .:..||
Zfish   786 QQRNQLRAFCEKCHRCL-------------SHAEQLVREHAFMCLS---DVLIAHNYQLQMWDSS 834

  Fly   725 NPSIRSVAHVPSGNELDILEGFLMEH-FLELSP---SDLMLETNS-----DQLQRIRSILTSYLK 780
            ..:  .:.:.|.......|..|::|| |:...|   |..:.|:.|     :.|.|.|::|::|.|
Zfish   835 AGT--PLLYTPDPKLQKALLSFILEHIFISPDPDSHSSKVSESESGEGRLEDLHRRRNLLSAYCK 897

  Fly   781 VVCLGVVPTMRASKFYEYYVKYHAPFGDVMRCSMELALQRNPIHFAMTMLHTCLLLYAKVFPDDT 845
            ::...|:....|::.::.||||:..|||:::.::....|.:.:..|.|::.....||.::..:..
Zfish   898 LIVHSVLEMSMAAEVFKQYVKYYNDFGDIIKETLNRTRQMDKMESARTLVQCLQQLYLRLKQEQD 962

  Fly   846 RHAAGQRALRPAEFSELMELANRLAKILISNPMEHRECVIALHRSGILFVFE-LAQKQPTEATKK 909
            |  ....:.|...:|.:.|||.|.:.....:.::.||.:..:||.||.|||: ..|:...::...
Zfish   963 R--GNTCSSRIQTYSSIKELARRFSLTFGWDQIKSRESLAMIHRDGIEFVFQGFVQQSEKQSPPY 1025

  Fly   910 LPFLRVLKVFVPLLLVQDKTRILNFFEPY--EQLIIPTCNRND 950
            :.:|.:|..|...||..||..|..:.:.:  ||:|   .||.:
Zfish  1026 VSYLTILSEFSSKLLKPDKKTIYGYLQKFAGEQVI---SNREE 1065

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SA-2NP_612109.3 STAG 134..217 CDD:285686 26/144 (18%)
si:ch211-269e2.1XP_017213324.1 STAG 182..290 CDD:285686 22/111 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170595636
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG60131
OrthoDB 1 1.010 - - D167826at2759
OrthoFinder 1 1.000 - - FOG0000572
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11199
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
76.920

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