DRSC/TRiP Functional Genomics Resources

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Protein Alignment SA2 and stag3

DIOPT Version :10

Sequence 1:NP_612109.3 Gene:SA2 / 38167 FlyBaseID:FBgn0043865 Length:973 Species:Drosophila melanogaster
Sequence 2:XP_012808812.2 Gene:stag3 / 100145469 XenbaseID:XB-GENE-995439 Length:1253 Species:Xenopus tropicalis


Alignment Length:1093 Identity:250/1093 - (22%)
Similarity:431/1093 - (39%) Gaps:226/1093 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 NDSQASNQMDFEIREECSIAPN----------------DEPVCVDGTVGDATNKSLLQMI-LSRK 59
            ::|.:....|||  |..|..|.                :|.||.         |.|.:.| :.|.
 Frog    75 DESISDEGSDFE--ETLSKRPRRASPGETVAAKRPRIAEETVCA---------KDLFEAIRMGRS 128

  Fly    60 RLSPTNKRNSHIESVAKYWGEFYLDSPTAALVALLQFVVEVSGSHYQIPDDTSMPFSYSDILSNS 124
            .:        |:  :...|.:.|.....|||:.|:.|::...|.:..:..:.......|||:...
 Frog   129 AM--------HV--LVDDWLDSYKQDREAALLELINFLMLACGCNGVVTLEMLENMQNSDIIRKM 183

  Fly   125 SSHFS-NTHIYPLI--RKPADVFVNQVGSFLNALLLVANKFRSDSY--QLFLVQLTNFVMACSES 184
            :..|: .|..|||:  .||...|....|.|...|:   |:.:.:..  :|.:..|.:.:...|:|
 Frog   184 TMEFNEETPDYPLLLSTKPWKKFHANFGDFFKVLV---NRCQYNIIYDELLMDALISLLTGLSDS 245

  Fly   185 NIRTFRHTATMIGLKIMT--------------------------------------ILSDLKSLD 211
            .:|.||||:|...:|:|:                                      :|:..:.|.
 Frog   246 QVRAFRHTSTFAAVKLMSGLVKVAWDVSHHLNTTKRQFVVEHAKSPETRSPERLEALLAKQRGLQ 310

  Fly   212 DEIAMTVWMQ--MFNSMFVARSRDIVTDIRLLCISELGQWFARYPHCHLQPTSLRIFYEALNDGS 274
            ..:...|.|.  :|..:||.|..|...|||.:|:.|:|.|...|....|..:.|:.....|.|..
 Frog   311 GNLEEVVDMMNGIFKGVFVHRYCDTSADIRAICMEEIGVWMRTYSQSFLSDSCLKYVGWTLYDKQ 375

  Fly   275 GDV-IQC-----SLDNISVLCRKDVLFSEIVALTSEFREILVELCLGKEDAIAEKSVQFLTHFHV 333
            |.| :||     ||.::..:..|..||      ||.|:..:|.:.|.||..:|.::::.:.....
 Frog   376 GAVRLQCIRTLHSLYSVPEMAPKLELF------TSRFKNRMVFMVLDKEQQVAVEAIKLIGLISQ 434

  Fly   334 LSAEILTDDVCRVLEQLIMAANRGLAQAAADLFILR-------------RNGLDGETFCQRVKHL 385
            ...::|:...|..:...:..::|.::.||......|             ||.|...:|   .:.|
 Frog   435 NMEDMLSKKDCDTIYPFVFVSSRAVSSAAGAFLYQRVLAHTVAETSPKGRNRLGNVSF---FRLL 496

  Fly   386 LQLFIECG-HEQADYLVDSLIDNCELVL-DWKSMIAVLLENPKSRELSDIHCSSLIAILLAGVKQ 448
            :..||:.. .|.|.||||||.:.....| ||.....:||...:.  |.|...|:||.||:|.::|
 Frog   497 MSFFIKSKLPEHAAYLVDSLWECAGAPLQDWVCQTDLLLLEEEG--LDDTDESALIEILVASMRQ 559

  Fly   449 ATAGEIPPGRY-------TKDLKREPRQGAQERATKCLAPVLPELLRTYANRLQDIERLLELPKY 506
            |..|..|.||.       .||.|.|.:    .|.|:.:...||.||..::...:.:..||::..:
 Frog   560 AVEGTSPVGRVPARRAFALKDRKAEDK----SRLTRHMILALPPLLAKFSADSKKVRTLLKITSF 620

  Fly   507 -----FCFDYYHE--QNRMGQLNELVE-HFELIIFDQTSSTTVL-----QITVKTLEFLNRMIPI 558
                 :|.|...:  ...:.::.|::| |.|..:.:..|....:     |...:..:.....:..
 Frog   621 MELEIYCTDRMEKFLDTLLAEVQEILEKHTEEDVLESCSRALYILCDRKQALYQRADIARSTLMD 685

  Fly   559 PLTKQLLNSAVTNYKMAWHRTQDTSPSR-STHNESNRLLATLRLLTVL-SGHFNLSKWDLTEPLL 621
            .||.:.|....       ...|:|.|.. :.:|    :.||::.::.| ||| :||.|:|..|  
 Frog   686 RLTGRFLQQVP-------EIMQETEPDEDAVYN----IAATMKRISPLYSGH-DLSHWELFGP-- 736

  Fly   622 FSLKMLLRQRRLPNGDDLPPEAFSLYLKACFCCLCWDM---ENLEGTALNNVD-----MDEYCDV 678
             ..::||  :.:..| ::|.:.....|..|...|.|::   .|.:|.. |.:.     :.::||:
 Frog   737 -CSQILL--KGMDTG-EVPEQIVMAALTCCHFSLLWELFHISNSKGPQ-NQISPLKQKLRQFCDI 796

  Fly   679 LHHNLEDYLYVTFSLVGKSNTEPLAYPCFSYTCDLFVLHGN-LCGSSNPSIRSVAHVPSGNELDI 742
            ....|.|.            ...:....|....||.|:.|: :.......::.:|:.||.:....
 Frog   797 CQGCLSDL------------NAAIRKQAFVLLSDLLVIFGSPIAQEQRFYLQPLAYRPSLSLQAE 849

  Fly   743 LEGFLMEHFLELSPSDLMLETNSDQLQRIRSILTSYLKVVCLGVVPTMRASKFYEYYVKYHAPFG 807
            |.|||:::.. ..|.:......::.|...|::|..|.|::....:....||..:.:|||::|.:|
 Frog   850 LAGFLLDNVF-TDPEEENEARRTETLHERRNLLAGYCKLILYSSLQLHSASDIFRHYVKFNASYG 913

  Fly   808 DVMRCSMELALQRNPIHFAMTMLHTC------------LLLYAKVFPD--DTRHAAGQRALRPAE 858
            |:::                ..||.|            ||...:.|.:  ....:..||:.||  
 Frog   914 DLIK----------------ETLHKCRSISREETTKTVLLSLTQAFTELCQEGDSPPQRSSRP-- 960

  Fly   859 FSELMELANRLAKILISNPMEHRECVIALHRSGILFVFELAQKQPTEATKKLPFLRVLKVFVPLL 923
            |.|:..||.|||.:...:...:|:.::.||:.||.:... ..|....:.:.|.||.||..|....
 Frog   961 FLEIRGLARRLALLYGPDQRRYRQDIVLLHKEGIKYCLR-ENKTSDWSPQNLLFLDVLSEFSHKT 1024

  Fly   924 LVQDKTRILNFFEPYEQLIIPT--CNRNDI-AHLKEYRNAL-----RPRKTKS 968
            :.:||..:|.:.|...:..:|:  ...|:| |....||.:|     .|..|:|
 Frog  1025 IKEDKKALLRYLEETTERCLPSQPVKDNEIWAPFLAYRKSLCADEESPPSTES 1077

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SA2NP_612109.3 IRR1 <115..>329 CDD:227824 65/264 (25%)
STAG 132..>215 CDD:462502 24/124 (19%)
stag3XP_012808812.2 IRR1 29..>428 CDD:227824 88/382 (23%)
STAG 192..305 CDD:462502 23/115 (20%)

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