DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment FucTD and ft2

DIOPT Version :9

Sequence 1:NP_612107.1 Gene:FucTD / 38164 FlyBaseID:FBgn0035217 Length:447 Species:Drosophila melanogaster
Sequence 2:XP_005168265.1 Gene:ft2 / 792063 ZFINID:ZDB-GENE-990715-18 Length:405 Species:Danio rerio


Alignment Length:314 Identity:75/314 - (23%)
Similarity:125/314 - (39%) Gaps:62/314 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   128 MILLWNEPSLVNAPAHVEC-------GCLVTTSRSHNDKAFDAVV----ISADHPYSFEGLGGVK 181
            ::|:|..|..|..... :|       ||.:|..||...:|...:.    :|||.|.        .
Zfish   113 IVLIWMAPFGVRFDLK-DCGSEYNIHGCQLTYDRSMIQQAHGVMFHHRDMSADFPQ--------P 168

  Fly   182 LHPDF--YAVYAAKKPLSSTQNPLTNFTLPPFNLTMTYRLDSQLIWTDYYFSHTNLARRLKWFRA 244
            ..|.|  :..:..:.|....||...|   ..||:|.:|..:|. |...|        .||.....
Zfish   169 PRPAFQKWIWWNMESPSHCNQNDFLN---DRFNVTSSYNRNSD-IPVPY--------GRLVDATD 221

  Fly   245 PSKSFADDMPATTVLRLESEILKKSRLAVYLVYEVNEKTLPESLYMEELRKYADLDAH----DNC 305
            ..|:|.              |.||.:|..::|....|.......|. |..|:.:::.:    :|.
Zfish   222 EQKNFT--------------IPKKDKLVCWIVSNFQEHHKRTHFYY-EFAKHINVETYGGHFNNR 271

  Fly   306 LGTDD----CSHYHFMLIFETSACPDYVPPQMSMAMDKLLVPVLIGGG--NLTNLVPSHSYISSQ 364
            :.::|    .|...|.|.||.|...||...::...:....|||:||..  |....:|..::|...
Zfish   272 INSEDYGNVVSSCKFYLSFENSIHRDYFTEKLFNPLALGTVPVVIGPPRYNYEEFIPRDAFIHVD 336

  Fly   365 DFATPQDLIIHLKDLANNQLEYRRYFWWHSIYRLRKTS---QPYCALCSLIQQS 415
            ||.:|::|..||..|..|:.:|:::|.|..:|..:.||   :..|.:|..::::
Zfish   337 DFPSPKELADHLISLDQNEEQYKQFFNWRKLYVSKSTSFGLEHSCKICDYLKRN 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FucTDNP_612107.1 Glyco_tran_10_N 125..228 CDD:293644 27/112 (24%)
Glyco_transf_10 268..427 CDD:279224 41/161 (25%)
ft2XP_005168265.1 Glyco_tran_10_N 113..214 CDD:293644 28/121 (23%)
Glyco_transf_10 231..400 CDD:279224 41/161 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170575273
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D394490at33208
OrthoFinder 1 1.000 - - FOG0000215
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11929
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.950

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