DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment FucTD and fut7

DIOPT Version :9

Sequence 1:NP_612107.1 Gene:FucTD / 38164 FlyBaseID:FBgn0035217 Length:447 Species:Drosophila melanogaster
Sequence 2:NP_001032467.1 Gene:fut7 / 562250 ZFINID:ZDB-GENE-060929-997 Length:352 Species:Danio rerio


Alignment Length:384 Identity:88/384 - (22%)
Similarity:146/384 - (38%) Gaps:95/384 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 LKVMAVVLTICLVFTTIPLLRRQTMQESD----NLRMILLWNEP--SLVNAPAHVEC-------G 147
            |.:...:||..|:::.:||:..|.:..|:    |...||||:.|  ...|....| |       |
Zfish    19 LPLFICLLTASLIYSLLPLIGEQHLNSSNASFTNNITILLWHWPFGMRYNLTGDV-CLRDYNISG 82

  Fly   148 CLVTTSRSHNDKAFDAVVISADHPYSFEGL---GGVKLHPDFYAVYAAKKPLSSTQNPLTNFTLP 209
            |::..:::..:.| |.||.     ::||.:   ..:.||  .|.....:....|.:.|..|..|.
Zfish    83 CILVDNQTLYESA-DLVVF-----HNFELMFHKQQLPLH--LYRPAKQRWVWLSLEAPQNNGNLS 139

  Fly   210 P----FNLTMTYR-------------------LDSQLIWTDYYFSHTNLARRLKWFRAPSKSFAD 251
            |    |||||:|.                   ||..:..:..|.:...::...||.:. |:.|.:
Zfish   140 PFKNIFNLTMSYHPGADITVPYGKLLLRTNPGLDVIVPKSKRYEACWVISNYKKWHKR-SEVFQE 203

  Fly   252 DMPATTVLRLESEILKKSRLAVYLVYEVNEKTLPESLYMEELRKYADLDAHDNCLGTDDCSHYHF 316
                          |.|| |.|.|.....:|.||:...:..:                  |..:|
Zfish   204 --------------LTKS-LNVQLYGSFGQKPLPKEALLPTI------------------SRCYF 235

  Fly   317 MLIFETSACPDYVPPQM-SMAMDKLLVPVLIG--GGNLTNLVPSHSYISSQDFATPQDLIIHLKD 378
            .|.||....|.|:..:: ..|.....|||::|  ..:...:.|..|:|...||.:.:.|..:|:.
Zfish   236 YLAFENVQSPHYITEKLWRNAFQARTVPVVLGPPRTDYEAVTPPKSFIHVDDFKSVKALSEYLRG 300

  Fly   379 LANNQLEYRRYFWWHSIYRLRKTS---QPYCALCSLIQQSPGGHEVRQRSYSLGFINWW 434
            |..:..:|..||.|...|.::..:   :..|.:|.:..|.|.     |:.|  |.:..|
Zfish   301 LIKDPEKYNEYFSWQKKYVVKLYTDWRERLCNICPINGQFPA-----QKVY--GDLGAW 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FucTDNP_612107.1 Glyco_tran_10_N 125..228 CDD:293644 33/137 (24%)
Glyco_transf_10 268..427 CDD:279224 38/164 (23%)
fut7NP_001032467.1 Glyco_tran_10_N 52..162 CDD:293644 31/118 (26%)
Glyco_transf_10 178..349 CDD:279224 46/211 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170575260
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2619
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D394490at33208
OrthoFinder 1 1.000 - - FOG0000215
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11929
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.850

Return to query results.
Submit another query.