DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment FucTD and Fut10

DIOPT Version :9

Sequence 1:NP_612107.1 Gene:FucTD / 38164 FlyBaseID:FBgn0035217 Length:447 Species:Drosophila melanogaster
Sequence 2:XP_017455693.1 Gene:Fut10 / 497619 RGDID:1359164 Length:483 Species:Rattus norvegicus


Alignment Length:360 Identity:80/360 - (22%)
Similarity:139/360 - (38%) Gaps:83/360 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 PLLRRQTMQESDNLRM------ILLWNEPSLVNAPAHVECG---CLVTTSRS--HN--DKAF--- 161
            ||.::..:..|...::      |:||..|.........:||   |..|.:|:  |:  .|||   
  Rat    61 PLPKKDALALSGRNKVDAGSYPIVLWWSPLTGETGRLGQCGADACFFTINRTFQHHPMTKAFLFY 125

  Fly   162 --DAVVISADHPYSFEGLGGVKLHPDFYAVYAAKKPLSSTQNPLTNFTL--PP----FNLTMTYR 218
              |..:.|...|.        |.|.|:        .|...::|..|:.|  .|    ||.|.|:.
  Rat   126 GTDFNIDSLPLPR--------KAHHDW--------ALFHEESPKNNYKLFHKPVITLFNHTATFS 174

  Fly   219 LDSQLIWTDYYFSHTNLARRLKWFRAPSKSFADDMPATTVLRLESEILKKSRLAVYLVYEVNEKT 283
            ..|.|..|..|.....:.:.|::                ::.|:|:...:.:||. |||..::..
  Rat   175 RHSDLPLTTQYLESVEVLKSLRY----------------LVPLQSKNNLRQKLAP-LVYVQSDCD 222

  Fly   284 LP--ESLYMEELRKYADLDAHDNCLGTDD-------------------CSHYHFMLIFETSACPD 327
            .|  ...|:.||..|.::|::..||....                   .:.|.|:|.||.:.|.|
  Rat   223 PPSDRDSYVRELMAYIEVDSYGECLQNKHLPQQLKNPASMDADAFYRVLAQYKFILAFENAVCDD 287

  Fly   328 YVPPQMSMAMDKLLVPVLIGGGNLTNLVPSH-SYISSQDFATPQDLIIHLKDLANNQLEYRRYFW 391
            |:..:....:...:|||..|...:.:.:||: |.|...:|:.|::|...::.|..:...|..|..
  Rat   288 YITEKFWRPLKLGVVPVYYGSPTIADWLPSNRSAILVSEFSHPRELASFIRRLDYDDGLYETYVE 352

  Fly   392 WHSIYRLRKTSQPYCALCSLIQQSPGGHEVRQRSY 426
            |    :|:........|.:|.::..|..::.|.:|
  Rat   353 W----KLKGEISNQRLLTALREREWGVQDINQDNY 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FucTDNP_612107.1 Glyco_tran_10_N 125..228 CDD:293644 31/126 (25%)
Glyco_transf_10 268..427 CDD:279224 42/181 (23%)
Fut10XP_017455693.1 Glyco_tran_10_N 83..181 CDD:407214 30/113 (27%)
Glyco_transf_10 219..>354 CDD:395683 31/138 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D551308at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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