DRSC/TRiP Functional Genomics Resources

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Protein Alignment FucTD and si:ch1073-440p11.2

DIOPT Version :9

Sequence 1:NP_612107.1 Gene:FucTD / 38164 FlyBaseID:FBgn0035217 Length:447 Species:Drosophila melanogaster
Sequence 2:XP_002665488.1 Gene:si:ch1073-440p11.2 / 100333886 ZFINID:ZDB-GENE-140106-39 Length:388 Species:Danio rerio


Alignment Length:377 Identity:86/377 - (22%)
Similarity:144/377 - (38%) Gaps:81/377 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 SPIQCMNALKVMAVVLTICLVFTTIPLLRRQTMQESDNLRMILLWNEPSLVNAPAHVE-CGCLVT 151
            |.:|..|...::....|:.|...:....:..|...:    :||:|..|  ..|...:: |..:..
Zfish    60 SALQKPNQTHIINNTCTVNLTSVSSHFTQASTTPHT----VILIWTWP--FGAKFDLDSCSSMFD 118

  Fly   152 TSRSHNDKAFDAVVISADHPYSFEGLGGVKLH-----PDFYAVYAAKKPL----------SSTQN 201
            ....|         ::.|..| |:...||..|     .|...:....:|.          |.:.:
Zfish   119 IHSCH---------LTDDRGY-FQEADGVFFHHRDIDADLSNIPNQPRPRLQKWIWMNMESPSNS 173

  Fly   202 PLTNFTLPPFNLTMTYRLDSQLIWTDYYFSHTNLARRLKWFRAPSKSFADDMPATTVLRLESEIL 266
            |..:.....||||.:|||||.:              .:.:.|..|...:..:|            
Zfish   174 PRYSSLDDLFNLTSSYRLDSDI--------------SVPYGRLISGKTSGSIP------------ 212

  Fly   267 KKSRLAVYLVYEVNEKTLPESLYMEELRKYADLDAHDNCLG--------TDDCSHYHFMLIFETS 323
            ||::|..::|...| .|...|.|.:||:|:.::|.:.|...        |...|...|.|.||.|
Zfish   213 KKTKLVCWIVSNWN-STYKRSQYYQELKKHINIDVYGNAFSKRISSEDYTSVVSSCRFYLSFENS 276

  Fly   324 ACPDYVPPQMSMAMDKLLVPVLIG--GGNLTNLVPSHSYISSQDFATPQDLIIHLKDLANNQLEY 386
            ...||:..::...:....|||::|  ..|....:|:.::|..:||:.|:.|..|||.|..|:..|
Zfish   277 VHKDYITEKLFNPLILGTVPVVLGPPRRNYEEQIPAGAFIHIEDFSGPEGLAEHLKLLEKNEDLY 341

  Fly   387 RRYFWWHSIYRLRKTS---QPYCALCSLIQQSPGGHEVRQRSYS-LGFINWW 434
            .:||.|...:...::|   :..|..|.        |..|.|:|. :..:|.|
Zfish   342 MQYFSWREEFVASESSFGLEHACRACD--------HVRRHRNYRVVNELNGW 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FucTDNP_612107.1 Glyco_tran_10_N 125..228 CDD:293644 26/118 (22%)
Glyco_transf_10 268..427 CDD:279224 47/171 (27%)
si:ch1073-440p11.2XP_002665488.1 Glyco_tran_10_N 93..200 CDD:293644 26/136 (19%)
Glyco_transf_10 214..383 CDD:279224 48/177 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170575274
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2619
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D394490at33208
OrthoFinder 1 1.000 - - FOG0000215
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11929
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.850

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