DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9168 and CG1428

DIOPT Version :9

Sequence 1:NP_612106.2 Gene:CG9168 / 38163 FlyBaseID:FBgn0035216 Length:648 Species:Drosophila melanogaster
Sequence 2:NP_610127.1 Gene:CG1428 / 35433 FlyBaseID:FBgn0032967 Length:617 Species:Drosophila melanogaster


Alignment Length:602 Identity:167/602 - (27%)
Similarity:264/602 - (43%) Gaps:112/602 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   116 VIGRNKKDSFPDNHFSFSKLQPLSQ-----------------SFLVPKTI-DFIS---------T 153
            |.|:.|..:|      :|.::|:::                 :||..|.| :.:|         |
  Fly    54 VSGQWKPTAF------YSAIEPVNKLRCRMTQLLTAITQDGSNFLEAKRISEDLSCRYWLKSGHT 112

  Fly   154 QCHAVH----GNIDL------KLLQKDAFLFVQDRLNHEHKNTEHH---------RPDLQS---- 195
            :.|:.|    |:.||      |:........|:.|.:.:.|.:::|         .|.|.|    
  Fly   113 RNHSGHYTAYGHFDLKRGATRKIKIGTGEQIVRIRCSDKFKASKYHDVLYFLSPPDPKLMSTESS 177

  Fly   196 -KPNVIILGIDSTSRMNLRRSMPKVHKFLQRPGWFEMQGYNKVGENTLPNLLAILTGNAEENALF 259
             |.:|::|||||.|.|:..|..|.|..||:.....:..||::||.:...||:..|.|.:...|  
  Fly   178 EKLSVMVLGIDSVSHMHFVRYFPLVMAFLENHPHTKFFGYSRVGLDANANLVPFLGGKSSRAA-- 240

  Fly   260 NGRFGHSGFIDKLKFIWQLFKKNGYMTAFGEDCAK--INTFNYQKPGFKQQPVDFYLRNFIVALE 322
                |.....|:..::|..||..||.||:|||.||  ::..|..|. ..:.||||.|...||.:.
  Fly   241 ----GSDILSDEKAWLWDSFKMEGYSTAYGEDNAKGILSNRNGDKE-LPKSPVDFDLTPVIVEMN 300

  Fly   323 TILKTR-----REFGNVFC-LGRKLGFQYVF-DFARQFMQRFENSAPVFGIFWSNSFTHEDFLGA 380
            .  .||     :|.  :.| .|||  ||.|. ||..|.:. :....|.|..||.:....|.:..|
  Fly   301 N--HTRYSIDLKEM--IHCTAGRK--FQDVLRDFVLQLVP-YMQGMPFFSFFWQSQGVQEYYEYA 358

  Fly   381 TALDHVFLEYLTLYDEL---GFFNRSIVMVLSDHGYRYGVTRQASKSGYLEERLPLMFIHVPPWF 442
            ..||   |.|:.|..:|   ...|.:::.::||||.|.|..|. |..|..||..|||....|.|.
  Fly   359 WHLD---LSYMMLLKKLLDADILNNTLLFLMSDHGLRAGEYRM-SLQGMKEESQPLMVAIYPEWL 419

  Fly   443 RKIYPQYVENLKINQNRLSSGFDLHMTLHHLLHLNATSMADFSPKLQASQCKMCQ------SLFF 501
            ::.||..|.||:.|.:.|.:.:||..||..::.|.....|:....::..|.....      |||.
  Fly   420 KRKYPLAVGNLESNAHSLITPYDLRETLADVIALGQLKDANIEVSMKRLQSHPPNRLPRGISLFL 484

  Fly   502 QLPANRNCSHAGIREKWCSC-EPTETVTNQRLLRKVAQEVVHHMNRHLRDRNLTTLCQNYALKKV 565
            .:|.:|.|..|.|...:|.| |.||..|:..|:.:.::.:|..:|:.::...   .|:...|:.|
  Fly   485 PIPDHRTCDLAHIPSLFCFCRELTEVPTDDGLVLRSSRFMVESINQLIKPFG---QCRQLKLEMV 546

  Fly   566 L---YLDSKISLSEDSVEDEQLHTYIITFETNPSSAHFEATVQWNSEKETLNMNVDELSRLESYE 627
            |   :||    ..|:|.    ::...:...|:|.:..:||||:.:.    :.:....:||:..|.
  Fly   547 LLAHFLD----FGEESF----VYELRLRVRTSPGNGVYEATVRLSD----VLLLTSPISRVSHYL 599

  Fly   628 KHSKCTRDPIIKKYCIC 644
            ..|.|..||.::.:|:|
  Fly   600 GQSHCIGDPDLQIFCLC 616

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9168NP_612106.2 DUF229 64..566 CDD:308570 146/519 (28%)
CG1428NP_610127.1 DUF229 68..547 CDD:281053 141/499 (28%)
ALP_like 180..453 CDD:293745 98/290 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466480
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D31599at6960
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10974
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.950

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