DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9168 and F10C2.3

DIOPT Version :9

Sequence 1:NP_612106.2 Gene:CG9168 / 38163 FlyBaseID:FBgn0035216 Length:648 Species:Drosophila melanogaster
Sequence 2:NP_506015.2 Gene:F10C2.3 / 179650 WormBaseID:WBGene00008644 Length:604 Species:Caenorhabditis elegans


Alignment Length:678 Identity:172/678 - (25%)
Similarity:288/678 - (42%) Gaps:125/678 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VFLLCSIQFLLCKAKLSLHSHYPN------VAKTLENKKFYV-----DSPSCKMPEMDPFSADIM 60
            :|.||:..||           :|:      :::.|:.::...     .|..|.:|.:||:...|:
 Worm    10 LFFLCTTVFL-----------FPDLFASSTISRNLKTRRSVARQKQNSSSKCVVPTLDPWDQSIL 63

  Fly    61 RFFKRRQFRECSSDKDLLISEFDSHLRQYRIKIDENSA-QQHLKKFGNATLKCEYQVIGRNKKDS 124
            .:...      ...:...::..|:.::.....:|||.. |.:......::||.|.|....:|.|.
 Worm    64 EYVLD------DGSRPTQLACHDAKVQPELTFLDENGVLQLNSTAVSESSLKVECQYRTYDKMDG 122

  Fly   125 FPDNHFSFSKLQPLSQSFLVPKTIDFISTQCH-------AVHGNIDLKLLQKDAFLFVQDRLNHE 182
             .|...::|:....:.|..:..  :|:...|.       .|:.|                  ||.
 Worm   123 -DDEQLNYSEWISFNMSVKIES--EFVEVSCQRAWFPRTKVYSN------------------NHN 166

  Fly   183 HKNTEHHRPDLQSKPNVIILGIDSTSRMNLRRSMPK----VHKFLQRPGWFEMQGYNKVGENTLP 243
            ..........:..|.:||::.:||.|..|.||:|.|    :|...   |.|...|..|:|:|:..
 Worm   167 QIIPISRSQPVSDKSSVIVIVLDSVSHSNFRRTMNKTLDVMHSLY---GSFIFDGMTKIGDNSFS 228

  Fly   244 NLLAILTGNAEENALFNGRFGHS-GFIDKLKFIWQLFKKNGYMTAFGEDCAKINTFNYQKPGFKQ 307
            |.:....|.     .:|..||.: |:.|....||:.:::|||.|.:.||....|.|||...|||:
 Worm   229 NAVGFFAGK-----WWNTEFGDAHGYFDDHDLIWKHYRENGYRTLYAEDYPGFNLFNYLSKGFKK 288

  Fly   308 QPVDFYLRNFIVALETILKTRREFGNVFCLGRKLGFQYVFDFARQFMQRFENSAPVFGIFWSNSF 372
            :|||.|.|.:.:.:......||  ....|.|.........::..||:.::::. |.|.|.|    
 Worm   289 KPVDHYFRPYWLNVYWTYVHRR--SRNLCYGNHRMHNLQLNYLSQFVSKYKDQ-PKFAISW---- 346

  Fly   373 THEDFLGATALDHVFLEYLTLYDE-LGFF--------NRSIVMVLSDHGYRYGVTRQASKSGYLE 428
                   .|.|.|.:|..:...|| |..|        ..|.:.::||||:|:...|:.| .|.||
 Worm   347 -------LTELGHDWLNQVRYGDEDLANFLKKHVEDLENSYLFIMSDHGHRFDNIRKTS-IGRLE 403

  Fly   429 ERLPLMFIHVPPWFRKIYPQYVENLKINQNRLSSGFDLHMTLHHLLHLNATSMADFSPKLQASQC 493
            ||||...:.:|...|| ..:.|:.::.|..:|:|.||::.|..|:  ||.:...|         .
 Worm   404 ERLPFFSVSLPKKLRK-DSKLVDTVRKNSKKLTSFFDVYATFRHI--LNNSKQPD---------V 456

  Fly   494 KMCQSLFFQLPANRNCSHAGIREKWCSCEPTE---TVTNQRLLRKVAQEVVHHMNRHLRDRNLTT 555
            ...:|||..: .:|||..|.|.|::|.|: ||   .|:....:|.:|::....:|:.|...   .
 Worm   457 MRGESLFLPI-KDRNCETAHIPEEFCVCD-TEVPLNVSANAQIRTMAEDFAKDINQRLDPH---P 516

  Fly   556 LCQNYALKKVLYLDSKISLSEDSVEDEQLHTYIITFETNPSSAHFEATVQWNS-EKETLNMNVDE 619
            .|..      |||.:.||:|:  |.|.:...|..|.|.:||:|.|||.:.::. |.:|  ..:.:
 Worm   517 QCVQ------LYLKNVISVSQ--VGDVKEQRYRFTIEVSPSNAIFEALLLYDPFESQT--TVIGD 571

  Fly   620 LSRLESYEKHSKCTRDPIIKKYCICKEF 647
            ::|:..|...|.|.:|..::|.|.|..|
 Worm   572 INRINKYGNQSLCVQDQFLRKLCFCSTF 599

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9168NP_612106.2 DUF229 64..566 CDD:308570 131/526 (25%)
F10C2.3NP_506015.2 DUF229 110..527 CDD:281053 127/483 (26%)
ALP_like 182..451 CDD:293745 90/294 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm4742
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10974
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

Return to query results.
Submit another query.