DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp61F and ptprga

DIOPT Version :9

Sequence 1:NP_476687.1 Gene:Ptp61F / 38160 FlyBaseID:FBgn0267487 Length:548 Species:Drosophila melanogaster
Sequence 2:NP_001316793.1 Gene:ptprga / 561197 ZFINID:ZDB-GENE-101101-4 Length:1414 Species:Danio rerio


Alignment Length:398 Identity:118/398 - (29%)
Similarity:180/398 - (45%) Gaps:76/398 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 HRF---YKEICETCDREAKEKQFSTSESERH-TNRGLNRYRDVNPYDHSRIVLK------RGSVD 85
            |.|   ::|: :.|..:.|    .|:|...| .|:..|||.::..|||||:.|:      ....|
Zfish   815 HGFSDDFEEV-QRCTADMK----ITAEHSNHPDNKHKNRYINIIAYDHSRVKLRPLAGKDSKHSD 874

  Fly    86 YINANLVQLERAERQYILTQGPLVDTVGHFWLMVWEQKSRAVLMLNKLMEKKQIKCHLYWPNEMG 150
            |||||.|......:.||..||||..|...||.|||||.:..::|:..|:||.:.||..|||:|..
Zfish   875 YINANYVDGYNKPKAYIAAQGPLKSTFEDFWRMVWEQNTGIIVMITNLVEKGRRKCDQYWPSENS 939

  Fly   151 ADKALKLPHVKLTVELVRLETYQNFVRRWFKLTDLET-----------QQSREVMQFHYTTWPDF 204
            .:      :..:.|.|.|.:....:..|.|.:.:.:.           |..|.|:|:|||.|||.
Zfish   940 EE------YGNIVVTLKRTKVMACYTLRIFTIRNTKVKKGQKGNTKGRQSERTVLQYHYTQWPDM 998

  Fly   205 GIPSSPNAFLKFLQQVRDSGCLSRDVGPAVVHCSAGIGRSGTFCLVDCCLVLIDKYGECNVSKVL 269
            |:|......|.|::  :.|...:.|:||.:||||||:||:||:.::|..|..:...|..||...|
Zfish   999 GVPEYTLPVLTFVR--KSSAAQTPDMGPMLVHCSAGVGRTGTYIVIDSMLQQLKDKGAVNVLGFL 1061

  Fly   270 CELRSYRMGLIQTADQLDFSYQAIIEGIKKLHDPTFLDAEEPLISNDTETHTLDELPPPLPPRVQ 334
            ..:|:.|..|:||.:|..|.:.|::|.|               :..:||.        |......
Zfish  1062 KHIRTQRNYLVQTEEQYIFIHDALMEAI---------------LGKETEV--------PSSQLHS 1103

  Fly   335 SLNLPLAPNSGG----------ILSLNMRAAQANGAESIGKELSKDALNNFINQHDMIHDAEVAD 389
            .:|..|.|..||          :...|.|..:...|:   |:.:|:.     |::..:..:|.| 
Zfish  1104 YVNSILTPGPGGKTRLEKQFKLVTQCNARFVECFSAQ---KDCNKEK-----NRNSSVVPSERA- 1159

  Fly   390 SRPLPPLP 397
            ...|.|||
Zfish  1160 RVGLAPLP 1167

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp61FNP_476687.1 PTPc 34..295 CDD:214550 94/278 (34%)
PTPc 62..295 CDD:238006 87/249 (35%)
ptprgaNP_001316793.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0789
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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