DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ptp61F and Ptp10D

DIOPT Version :9

Sequence 1:NP_476687.1 Gene:Ptp61F / 38160 FlyBaseID:FBgn0267487 Length:548 Species:Drosophila melanogaster
Sequence 2:NP_996413.2 Gene:Ptp10D / 32115 FlyBaseID:FBgn0004370 Length:1990 Species:Drosophila melanogaster


Alignment Length:559 Identity:142/559 - (25%)
Similarity:229/559 - (40%) Gaps:129/559 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 NRGLNRYRDVNPYDHSRIVLK-----RGSVDYINANLVQLERAERQYILTQGPLVDTVGHFWLMV 119
            ||..||:.::.||||||..|:     .|| ||||||.|....:.|::|:|||||..|...||.|.
  Fly  1296 NRPKNRFTNILPYDHSRFKLQPVDDDEGS-DYINANYVPGHNSPREFIVTQGPLHSTRDDFWRMC 1359

  Fly   120 WEQKSRAVLMLNKLMEKKQIKCHLYWPNEMGADKALKLPHVKLTVELVRLETYQNFVRRWFKLTD 184
            ||..|||::||.:..||.:.||..||||:     .:.:.:..:.|:::....|.::|...|.|  
  Fly  1360 WESNSRAIVMLTRCFEKGREKCDQYWPND-----TVPVFYGDIKVQILNDSHYADWVMTEFML-- 1417

  Fly   185 LETQQSREVMQFHYTTWPDFGIPSSPNAFLKFLQQVRDSGCLSRDVGPAVVHCSAGIGRSGTFCL 249
            ....:.|.:..||:|||||||:|:.|...::|::..||.  :..:..|.|||||||:||||||..
  Fly  1418 CRGSEQRILRHFHFTTWPDFGVPNPPQTLVRFVRAFRDR--IGAEQRPIVVHCSAGVGRSGTFIT 1480

  Fly   250 VDCCLVLIDKYGECNVSKVLCELRSYRMGLIQTADQLDFSYQ---AIIEG-------IKKLHD-- 302
            :|..|..|:.....::..::..:|..|:.::||..|....:|   |::||       .:::||  
  Fly  1481 LDRILQQINTSDYVDIFGIVYAMRKERVWMVQTEQQYICIHQCLLAVLEGKENIVGPAREMHDNE 1545

  Fly   303 -----------------------------------------PTFLDAEEPLISNDTETHTLDELP 326
                                                     ....|.::||.|:.|..||  .:|
  Fly  1546 GYEGQQVQLDENGDVVATIEGHLSHHDLQQAEAEAIDDENAAILHDDQQPLTSSFTGHHT--HMP 1608

  Fly   327 PPLPPRVQSLNLPLAPNSGGILSLNMRAAQANGAESIGKELSKDALNNFINQHDMIHDAEV--AD 389
            |         ...::...||          ..|..::.   :.|. ::.:||.|..:...:  .|
  Fly  1609 P---------TTSMSSFGGG----------GGGHTNVD---APDRXHSVVNQSDNNNSVVIVLVD 1651

  Fly   390 SRPLPPLPVRAFNDSDSDEDYLLDDDDEDDTDEDEE-------YETINEHDADPVNGHVPATTQP 447
            ::|...:    ..||......:|:...:....:.::       ..||:     .:||:   .|..
  Fly  1652 NKPSSMI----CKDSKGGNIDVLESQQQQQQQQQQQPNQGGHNITTIS-----AINGY---NTLQ 1704

  Fly   448 H------------ADDVNANNEKPAVPVDEQHKANGIDPIPGQLPASPENELKRRKRNEYQASLE 500
            |            :.|:..:.....:.......||| .|..|....|.....:..:.|...:..|
  Fly  1705 HRRKSQLITFSSSSCDIKNSLSHEYINGSNGSAANG-PPSSGSGSGSGPGSNRASRANVRLSFAE 1768

  Fly   501 QKVN--DMKRKQRENEDKQLAAKKRRSLLTYIAAGVVVG 537
            :.|.  .....|:.|........:|||||. :..||.||
  Fly  1769 EDVMILPQNHSQQSNHQDDEVFTRRRSLLE-VEIGVEVG 1806

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp61FNP_476687.1 PTPc 34..295 CDD:214550 90/242 (37%)
PTPc 62..295 CDD:238006 88/240 (37%)
Ptp10DNP_996413.2 fn3 124..205 CDD:278470
fn3 220..304 CDD:278470
fn3 315..391 CDD:278470
FN3 405..494 CDD:238020
FN3 511..574 CDD:238020
FN3 583..671 CDD:238020
fn3 683..753 CDD:278470
fn3 787..850 CDD:278470
fn3 866..935 CDD:278470
fn3 961..1043 CDD:278470
PTPc 1272..1525 CDD:214550 89/238 (37%)
PTPc 1298..1525 CDD:238006 87/236 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45443509
Domainoid 1 1.000 133 1.000 Domainoid score I1104
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm46470
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

Return to query results.
Submit another query.