DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp61F and Ptprs

DIOPT Version :10

Sequence 1:NP_476687.1 Gene:Ptp61F / 38160 FlyBaseID:FBgn0267487 Length:548 Species:Drosophila melanogaster
Sequence 2:XP_038938986.1 Gene:Ptprs / 25529 RGDID:3452 Length:1916 Species:Rattus norvegicus


Alignment Length:297 Identity:110/297 - (37%)
Similarity:155/297 - (52%) Gaps:54/297 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 LQIEAEYKDKGPQWHRFYKEICETCDREAKEKQFSTSESERHTNRGLNRYRDVNPYDHSRIVLK- 80
            |::..||:...|                  .:||:...|....|:..|||.:|..|||||::|: 
  Rat  1359 LKLSQEYESIDP------------------GQQFTWEHSNLEANKPKNRYANVIAYDHSRVILQP 1405

  Fly    81 ----RGSVDYINANLVQLERAERQYILTQGPLVDTVGHFWLMVWEQKSRAVLMLNKLMEKKQIKC 141
                .|| ||||||.|...|.:..||.|||||.:|.|.||.|||||:|..|:|:.:|.||.::||
  Rat  1406 LEGIMGS-DYINANYVDGYRRQNAYIATQGPLPETFGDFWRMVWEQRSATVVMMTRLEEKSRVKC 1469

  Fly   142 HLYWPNEMGADKALKLPHVKLT---VELVRLETYQ--NFVRRWFKLTDLETQQSREVMQFHYTTW 201
            ..||||. |.:          |   :::..|:|.:  .|..|.|.|....:.:.|||..|.:|.|
  Rat  1470 DQYWPNR-GTE----------TYGFIQVTLLDTMELATFCVRTFSLHKNGSSEKREVRHFQFTAW 1523

  Fly   202 PDFGIPSSPNAFLKFLQQVRDSGCLSRDVGPAVVHCSAGIGRSGTFCLVDCCL------VLIDKY 260
            ||.|:|..|..||.||::|:.  |...|.||.|||||||:||:|.|.::|..|      ..:|.|
  Rat  1524 PDHGVPEYPTPFLAFLRRVKT--CNPPDAGPVVVHCSAGVGRTGCFIVIDAMLERIRTEKTVDVY 1586

  Fly   261 GECNVSKVLCELRSYRMGLIQTADQLDFSYQAIIEGI 297
            |...:      :||.|..::||.||..|.::|::|.:
  Rat  1587 GHVTL------MRSQRNYMVQTEDQYSFIHEALLEAV 1617

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp61FNP_476687.1 PTPc-N1_2 63..291 CDD:350393 100/243 (41%)
PtprsXP_038938986.1 I-set 33..124 CDD:400151
Ig strand B 50..54 CDD:409570
Ig strand C 63..67 CDD:409570
Ig strand E 86..93 CDD:409570
Ig strand F 104..109 CDD:409570
Ig strand G 117..120 CDD:409570
IgI_2_RPTP_IIa_LAR_like 137..226 CDD:409400
Ig strand A' 143..147 CDD:409400
Ig strand B 150..159 CDD:409400
Ig strand C 164..170 CDD:409400
Ig strand C' 172..174 CDD:409400
Ig strand D 183..187 CDD:409400
Ig strand E 190..195 CDD:409400
Ig strand F 204..211 CDD:409400
Ig strand G 214..225 CDD:409400
IgI_3_RPTP_IIa_LAR_like 235..316 CDD:409401
Ig strand A 235..237 CDD:409401
Ig strand A' 241..245 CDD:409401
Ig strand B 248..256 CDD:409401
Ig strand C 261..267 CDD:409401
Ig strand C' 269..271 CDD:409401
Ig strand D 274..278 CDD:409401
Ig strand E 283..288 CDD:409401
Ig strand F 295..302 CDD:409401
Ig strand G 306..315 CDD:409401
FN3 309..>711 CDD:442628
FN3 710..815 CDD:238020
FN3 823..899 CDD:214495
FN3 925..1013 CDD:238020
FN3 1018..1101 CDD:238020
R-PTPc-S-1 1338..1619 CDD:350473 110/297 (37%)
R-PTP-S-2 1621..1910 CDD:350475
Blue background indicates that the domain is not in the aligned region.

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