DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp61F and sdf-9

DIOPT Version :9

Sequence 1:NP_476687.1 Gene:Ptp61F / 38160 FlyBaseID:FBgn0267487 Length:548 Species:Drosophila melanogaster
Sequence 2:NP_508013.2 Gene:sdf-9 / 189901 WormBaseID:WBGene00004748 Length:345 Species:Caenorhabditis elegans


Alignment Length:334 Identity:85/334 - (25%)
Similarity:142/334 - (42%) Gaps:65/334 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 SERHTNR--GLNRYRDVN--PYDHSRIVLKRGSVD---YINANLVQLERAERQYILTQGPLVDTV 112
            |||.|.|  .:||.|.|.  |.....:.|....::   ||||:|::.....::||||..|..|.|
 Worm    22 SERVTARLEAVNRNRVVKIVPQHRYNVRLTPSMLNRDGYINASLMEFSDVGQKYILTGIPSEDKV 86

  Fly   113 GHFWLMVWEQKSRAVLMLNKLMEKKQIKCHLYWPNEMGADKALKLPHVKLTVELVRLETYQ-NFV 176
            ..||.||.||:|..::.....:|:|......|:|     ||.....:..|.||......:| ||.
 Worm    87 FAFWQMVLEQRSPTIIQFADNVEEKLEHYDKYFP-----DKGDVWSYGHLQVERKSYAIHQGNFH 146

  Fly   177 RRWFKLTDLETQQSREVMQFHYTTWPDFGIPSSPNAFLKFLQQVRDSGCLSRDVGPA-------- 233
            .|.|.|.  :..::..|:.|....|.:...|...: ||...:.::|:|.|:. :.||        
 Worm   147 TRNFILR--KGNETHRVLHFTVFGWTETTTPIMQD-FLALRKVMKDTGALNM-INPASALFRSTM 207

  Fly   234 ------------VVHCSAGIGRSGTFCLVDCCLVLID--KYGECNVSKVLCELRSYRMGLIQTAD 284
                        ::..:.|..|:|.|.::|..:.:||  |....:|..::.:.:..|:..:..|.
 Worm   208 RRYIHTPPSFAPIIQSARGSSRAGAFVVIDLLIRMIDGKKTNLYSVEDLIVKCKHMRIHCVPVAL 272

  Fly   285 QLDFSYQAIIEGIKKLHDPTFLDAEEPLISN-------------------DTETHTLDE------ 324
            ...|.|:|:::.:.: .:|.|.|.:||||:.                   :|:|..|:|      
 Worm   273 HHSFIYEAVLDYLLR-RNPRFQDFKEPLIAYSESCFVKWSSMDKEIEKFINTKTWFLNESSRNKF 336

  Fly   325 LPPPLPPRV 333
            |...:||.|
 Worm   337 LRSVMPPVV 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp61FNP_476687.1 PTPc 34..295 CDD:214550 70/269 (26%)
PTPc 62..295 CDD:238006 65/260 (25%)
sdf-9NP_508013.2 PTPc 7..283 CDD:214550 70/269 (26%)
PTPc 34..283 CDD:304379 64/257 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0789
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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