DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ptp61F and sdf-9

DIOPT Version :10

Sequence 1:NP_476687.1 Gene:Ptp61F / 38160 FlyBaseID:FBgn0267487 Length:548 Species:Drosophila melanogaster
Sequence 2:NP_508013.2 Gene:sdf-9 / 189901 WormBaseID:WBGene00004748 Length:345 Species:Caenorhabditis elegans


Alignment Length:334 Identity:85/334 - (25%)
Similarity:142/334 - (42%) Gaps:65/334 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 SERHTNR--GLNRYRDVN--PYDHSRIVLKRGSVD---YINANLVQLERAERQYILTQGPLVDTV 112
            |||.|.|  .:||.|.|.  |.....:.|....::   ||||:|::.....::||||..|..|.|
 Worm    22 SERVTARLEAVNRNRVVKIVPQHRYNVRLTPSMLNRDGYINASLMEFSDVGQKYILTGIPSEDKV 86

  Fly   113 GHFWLMVWEQKSRAVLMLNKLMEKKQIKCHLYWPNEMGADKALKLPHVKLTVELVRLETYQ-NFV 176
            ..||.||.||:|..::.....:|:|......|:|     ||.....:..|.||......:| ||.
 Worm    87 FAFWQMVLEQRSPTIIQFADNVEEKLEHYDKYFP-----DKGDVWSYGHLQVERKSYAIHQGNFH 146

  Fly   177 RRWFKLTDLETQQSREVMQFHYTTWPDFGIPSSPNAFLKFLQQVRDSGCLSRDVGPA-------- 233
            .|.|.|.  :..::..|:.|....|.:...|...: ||...:.::|:|.|:. :.||        
 Worm   147 TRNFILR--KGNETHRVLHFTVFGWTETTTPIMQD-FLALRKVMKDTGALNM-INPASALFRSTM 207

  Fly   234 ------------VVHCSAGIGRSGTFCLVDCCLVLID--KYGECNVSKVLCELRSYRMGLIQTAD 284
                        ::..:.|..|:|.|.::|..:.:||  |....:|..::.:.:..|:..:..|.
 Worm   208 RRYIHTPPSFAPIIQSARGSSRAGAFVVIDLLIRMIDGKKTNLYSVEDLIVKCKHMRIHCVPVAL 272

  Fly   285 QLDFSYQAIIEGIKKLHDPTFLDAEEPLISN-------------------DTETHTLDE------ 324
            ...|.|:|:::.:.: .:|.|.|.:||||:.                   :|:|..|:|      
 Worm   273 HHSFIYEAVLDYLLR-RNPRFQDFKEPLIAYSESCFVKWSSMDKEIEKFINTKTWFLNESSRNKF 336

  Fly   325 LPPPLPPRV 333
            |...:||.|
 Worm   337 LRSVMPPVV 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp61FNP_476687.1 PTPc-N1_2 63..291 CDD:350393 63/255 (25%)
sdf-9NP_508013.2 PTPc 7..283 CDD:214550 70/269 (26%)

Return to query results.
Submit another query.