DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp61F and VW02B12L.2

DIOPT Version :9

Sequence 1:NP_476687.1 Gene:Ptp61F / 38160 FlyBaseID:FBgn0267487 Length:548 Species:Drosophila melanogaster
Sequence 2:NP_496437.1 Gene:VW02B12L.2 / 189071 WormBaseID:WBGene00012155 Length:122 Species:Caenorhabditis elegans


Alignment Length:112 Identity:27/112 - (24%)
Similarity:48/112 - (42%) Gaps:20/112 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   228 RDVGPAVVHCSAGIGRSGTFCLVDCCLVLIDKYGECNVSKVLCELRSYRMGLIQTADQLDFSYQA 292
            |.:|..|| .:.|.||:.||......:..::...|.|:.:::..::..|.|.|::..|....|..
 Worm    12 RSLGMCVV-STFGSGRACTFIGALYAIHQLNNGVEPNIFEIMKTIKQQRPGAIESFPQYSGVYAI 75

  Fly   293 IIEGIKKLH----DPT------FL-DAEE--------PLISNDTETH 320
            :::.|.:..    ||.      || |..|        |:::..||.|
 Worm    76 VLDYISRKRGGKSDPVNKYINRFLADLTEILPACSTLPVMNPSTELH 122

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp61FNP_476687.1 PTPc 34..295 CDD:214550 16/66 (24%)
PTPc 62..295 CDD:238006 16/66 (24%)
VW02B12L.2NP_496437.1 PTPc_motif <1..78 CDD:214649 16/66 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0789
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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