DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ptp61F and F40G12.10

DIOPT Version :9

Sequence 1:NP_476687.1 Gene:Ptp61F / 38160 FlyBaseID:FBgn0267487 Length:548 Species:Drosophila melanogaster
Sequence 2:NP_506537.1 Gene:F40G12.10 / 179927 WormBaseID:WBGene00009605 Length:438 Species:Caenorhabditis elegans


Alignment Length:318 Identity:83/318 - (26%)
Similarity:133/318 - (41%) Gaps:56/318 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 RLQIEAEYKDKGPQWHRFYKEICETCDREAKEKQFSTSESERHTNRGLNRYRDVNPYDHSRIVLK 80
            |..:|.|:|.....     |...|.|....|...||.||             :|..||.:| |..
 Worm   138 RKTMEPEFKPIDTM-----KADLEKCQAFKKNIDFSQSE-------------NVELYDTNR-VKG 183

  Fly    81 RGSVD--YINANLVQLERAERQYILTQGPLVD---TVGHFWLMVWEQKSRAVLMLNKLMEKKQIK 140
            .|..|  |..:.|.......:..||.|..:||   ::..||:||..||.:.:.:|  |.|::..|
 Worm   184 GGEADFFYHGSTLTIPSVTTKSTILAQLAIVDSPQSLESFWIMVASQKIQRLFIL--LGEEELDK 246

  Fly   141 CHL--YWPNEMGADKALKLPH---VKLTVELVRLETYQNFVRRWFKLTDLETQQSR----EVMQF 196
            ..|  |:|.:....|.:::.:   |..|.|....:.|       :::...:..::.    |:..|
 Worm   247 PTLSEYFPEDFKEFKTIRVNNRKTVPKTEEQANTQLY-------YEVVPKDCAEAPFAMIEICDF 304

  Fly   197 HYTTWPDFGIPS-SPNAFLKFLQQVRDSGCLSRDVGPAVVHCSAGIGRSGTFCLVDCCLVLIDKY 260
                |||..||: ..|........|.:|. :..|...|:| .:.|.||:|:|.:   .::.|:|.
 Worm   305 ----WPDAKIPTMGYNRIAATAASVFESD-IDCDASCAIV-SNYGAGRAGSFFV---AVLAIEKL 360

  Fly   261 --GEC-NVSKVLCELRSYRMGLIQTADQLDFSYQ-AIIEGIKKLHDPTFLDAEEPLIS 314
              ||. |:.::...:||.|...|:|..|..|:|. |:..|:|.:.||......|.:||
 Worm   361 QAGEAPNIKEIALSVRSQRPAAIETLSQYMFTYVIALTYGLKHVKDPALKIKTEKVIS 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp61FNP_476687.1 PTPc 34..295 CDD:214550 72/279 (26%)
PTPc 62..295 CDD:238006 64/251 (25%)
F40G12.10NP_506537.1 PTPc 144..397 CDD:214550 73/289 (25%)
PTPc_motif 305..397 CDD:214649 29/96 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0789
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.