DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ptp61F and C55B7.3

DIOPT Version :9

Sequence 1:NP_476687.1 Gene:Ptp61F / 38160 FlyBaseID:FBgn0267487 Length:548 Species:Drosophila melanogaster
Sequence 2:NP_001367695.1 Gene:C55B7.3 / 172359 WormBaseID:WBGene00016942 Length:346 Species:Caenorhabditis elegans


Alignment Length:360 Identity:96/360 - (26%)
Similarity:164/360 - (45%) Gaps:62/360 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSEQK--------TSGSGSAAAARLQIEAEYKDKGPQWHRFYKEICETCDREAK----------- 46
            ||:.|        |..:.|:..:.:..|....::..|..:..|.:..|.::..:           
 Worm     1 MSKMKRRTNKPRATESANSSTKSSVLDEPTLVERKQQKKQILKFVQRTLEKMPQGLRAEFVGMRR 65

  Fly    47 ----EKQFSTSESERHTNRGLNRYRDVNPYDHSRIVLK-RGSVDYINANLVQLERAERQYILTQG 106
                ||..:..|::   ..|.|||:||...|::|:.|: ....:||:||.|......:::|.||.
 Worm    66 FNDFEKMKAFKEAQ---EAGKNRYKDVGCLDNNRVKLEGPWPHEYIHANYVATPTNPKRFICTQA 127

  Fly   107 PLVDTVGHFWLMVWEQKSRAVLMLNKLMEKKQIKCHLYWPNEMGADKALKLPHVKLTVELVRLET 171
            ||..|...||.|.::.|...:.||..|:||...||..|:|::.|.....:....|::|:.....|
 Worm   128 PLEKTCADFWYMCYQDKVEYIFMLCNLLEKGARKCFEYFPSKKGDVMDFEEGGQKISVKCESSVT 192

  Fly   172 YQNFVRRWFKLTDLET------QQSREVMQFHYTTWPDFGIPSSPNAFLKFLQQVRDSGCLSRDV 230
            |.........:|..|.      :::|:...:|:..|||.|:|::..|.|:.|:..|.|      .
 Worm   193 YSFRSDAKANVTATEIVIEGPGEKTRKTTHYHWNDWPDRGVPAADMAVLELLENARPS------K 251

  Fly   231 GPAVVHCSAGIGRSGTFCLVDCCL------VLIDKYGECNVSKVLCELRSYRMGLIQTADQLDFS 289
            ||.||||||||||:|:..:::..:      .:||. ||    |:|.::|..|...|||..|..|.
 Worm   252 GPIVVHCSAGIGRTGSVVMLEYIMDQLLAGQIIDD-GE----KILVKIREQRNNSIQTDAQYLFV 311

  Fly   290 YQAIIE-----------GIKKLHDPTFLDAEEPLI 313
            :|.|:.           |:::.:| .||:..:.::
 Worm   312 HQVILNYFRKKKLMEETGVQEAYD-AFLEQYKKVV 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp61FNP_476687.1 PTPc 34..295 CDD:214550 85/288 (30%)
PTPc 62..295 CDD:238006 80/245 (33%)
C55B7.3NP_001367695.1 Y_phosphatase 83..317 CDD:395053 79/244 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0789
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S2559
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.760

Return to query results.
Submit another query.