DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ptp61F and F47B3.1

DIOPT Version :9

Sequence 1:NP_476687.1 Gene:Ptp61F / 38160 FlyBaseID:FBgn0267487 Length:548 Species:Drosophila melanogaster
Sequence 2:NP_491278.1 Gene:F47B3.1 / 171984 WormBaseID:WBGene00018525 Length:363 Species:Caenorhabditis elegans


Alignment Length:258 Identity:80/258 - (31%)
Similarity:126/258 - (48%) Gaps:21/258 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 NRGLNRYRDVNPYDHSRIVLKRGSV--DYINANLVQLERAERQYILTQGPLVDTVGHFWLMVWEQ 122
            |...|||:||...|..|||:|...:  |||:||.:......:::|..||||.:|...||.|..::
 Worm    93 NTDKNRYQDVPCQDKGRIVVKFPGLASDYIHANYLGTATNPKKFICAQGPLENTQHSFWAMAIQE 157

  Fly   123 KSRAVLMLNKLMEKKQIKCHLYWPNEMGADKALKLPHVKLTVELVRLETYQNFV-RRWFKLTDLE 186
            |...|:||...:|..:||||.|||.|.|  :.|.......|:.:..|...:... .:...:|.|:
 Worm   158 KVECVIMLCNCIETGKIKCHQYWPLEQG--QKLVFGEAPNTISVANLGAKKMAPDEQCINVTTLK 220

  Fly   187 T---QQSREVMQFHYTTWPDFGIPSSPNAFLKFLQQVRDSGCLSRDVGPAVVHCSAGIGRSGTFC 248
            .   |.||.:....:..|||.|:|.:....:..|...|.      :..|.:|||||||||:||..
 Worm   221 VDWGQGSRTIQHLQWENWPDRGVPQTNLTAINLLSATRG------NQNPILVHCSAGIGRTGTIV 279

  Fly   249 LVDCCLVLIDKY--GE-C-NVSKVLCELRSYRMGLIQTADQLDFSYQAIIEGIKKLHDPTFLD 307
            .:   ..:.||.  || | .:::::.||||:|...||...|..:.::.::....:.:..|:.:
 Worm   280 AI---AYVQDKMMAGENCMAMNELIKELRSHRPWSIQNEFQYLYLHRVLLSYFLERYKETYAE 339

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp61FNP_476687.1 PTPc 34..295 CDD:214550 79/244 (32%)
PTPc 62..295 CDD:238006 78/242 (32%)
F47B3.1NP_491278.1 Y_phosphatase 93..326 CDD:278528 79/243 (33%)
PTPc 95..326 CDD:238006 78/241 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0789
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.