DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp61F and ptprfa

DIOPT Version :10

Sequence 1:NP_476687.1 Gene:Ptp61F / 38160 FlyBaseID:FBgn0267487 Length:548 Species:Drosophila melanogaster
Sequence 2:XP_068077727.1 Gene:ptprfa / 140819 ZFINID:ZDB-GENE-020107-2 Length:1910 Species:Danio rerio


Alignment Length:425 Identity:136/425 - (32%)
Similarity:198/425 - (46%) Gaps:65/425 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 RFYKEICETCDREAKEKQFSTSESERHTNRGLNRYRDVNPYDHSRIVLK-----RGSVDYINANL 91
            ||.:|. |:.|   ..:||:...|....|:..|||.:|..|||||:||.     .|| ||||.|.
Zfish  1354 RFSQEY-ESVD---PGQQFTWENSNLEVNKPKNRYANVIAYDHSRVVLTPVDGVPGS-DYINGNY 1413

  Fly    92 VQLERAERQYILTQGPLVDTVGHFWLMVWEQKSRAVLMLNKLMEKKQIKCHLYWPNEMGADKALK 156
            :...|.:..||.|||||.:|:..||.|||||::..::|:.:|.||.::||..|||:.  ..:...
Zfish  1414 IDGYRKQNAYIATQGPLPETLSDFWRMVWEQRTSTIVMMTRLEEKSRVKCDQYWPSR--GTETYG 1476

  Fly   157 LPHVKLTVELVRLETYQNFVRRWFKLTDLETQQSREVMQFHYTTWPDFGIPSSPNAFLKFLQQVR 221
            :..|.: ::.|.|.||.   .|.|.|....:.:.|||.||.:..|||.|:|..|...|.||::|:
Zfish  1477 MIQVSM-LDTVELATYS---VRTFALYKNGSSEKREVRQFQFMAWPDHGVPEYPTPILAFLRRVK 1537

  Fly   222 DSGCLSRDVGPAVVHCSAGIGRSGTFCLVDCCL------VLIDKYGECNVSKVLCELRSYRMGLI 280
              .|...|.||.|||||||:||:|.|.::|..|      ..:|.||.     |.| :||.|..::
Zfish  1538 --ACNPPDAGPMVVHCSAGVGRTGCFIVIDAMLERMKHEKSVDIYGH-----VTC-MRSQRNYMV 1594

  Fly   281 QTADQLDFSYQAIIEGIKKLHDPTFLDAEEPLISNDTETHTLDELPPPLPPRVQSLNLPLAPNSG 345
            ||.||..|.::|::|.      .|..:.|.|..|..|....|.:.||........|......|| 
Zfish  1595 QTEDQYIFIHEALLEA------ATCGNTEVPARSLYTHIQKLTQAPPGDTVTAMELEFKKLANS- 1652

  Fly   346 GILSLNMRAAQANGAESIGKELSKDALNNFINQHDMIHDAEVADSRPLPPLPVRAFNDSD----- 405
                      :|:.:..|...|   ..|.|.|:  :::......|| :...|:|....||     
Zfish  1653 ----------KAHTSRFISASL---PCNKFKNR--LVNIMPFESSR-VCLQPIRGVEGSDYINAS 1701

  Fly   406 ------SDEDYLLDDDDEDDTDEDEEYETINEHDA 434
                  ..:.|:.......:|.|| .:..:.||::
Zfish  1702 FIDGYRQQKAYIATQGPLSETTED-FWRMLWEHNS 1735

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp61FNP_476687.1 PTPc-N1_2 63..291 CDD:350393 96/238 (40%)
ptprfaXP_068077727.1 Ig strand F 210..217 CDD:409400
Ig strand G 220..231 CDD:409400
IgI_3_RPTP_IIa_LAR_like 241..322 CDD:409401
Ig strand A 241..243 CDD:409401
Ig strand A' 247..251 CDD:409401
Ig strand B 254..262 CDD:409401
Ig strand C 267..273 CDD:409401
Ig strand C' 275..277 CDD:409401
Ig strand D 280..284 CDD:409401
Ig strand E 289..294 CDD:409401
FN3 299..735 CDD:442628
Ig strand F 301..308 CDD:409401
Ig strand G 312..321 CDD:409401
FN3 716..812 CDD:238020
FN3 817..898 CDD:238020
FN3 915..1003 CDD:238020
FN3 1013..1082 CDD:238020
PTP_DSP_cys 1340..1613 CDD:475123 107/283 (38%)
PTP_DSP_cys 1615..1905 CDD:475123 28/139 (20%)
I-set 33..124 CDD:400151
Ig strand B 50..54 CDD:409353
Ig strand C 63..67 CDD:409353
Ig strand E 86..93 CDD:409353
Ig strand F 104..109 CDD:409353
Ig strand G 117..120 CDD:409353
IgI_2_RPTP_IIa_LAR_like 136..232 CDD:409400
Ig strand A 136..138 CDD:409400
Ig strand A' 143..147 CDD:409400
Ig strand B 150..159 CDD:409400
Ig strand C 164..170 CDD:409400
Ig strand C' 172..174 CDD:409400
Ig strand D 183..187 CDD:409400
Ig strand E 196..201 CDD:409400
Blue background indicates that the domain is not in the aligned region.

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