DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ptp61F and ptprr

DIOPT Version :9

Sequence 1:NP_476687.1 Gene:Ptp61F / 38160 FlyBaseID:FBgn0267487 Length:548 Species:Drosophila melanogaster
Sequence 2:NP_001096479.1 Gene:ptprr / 100125100 XenbaseID:XB-GENE-961693 Length:656 Species:Xenopus tropicalis


Alignment Length:238 Identity:86/238 - (36%)
Similarity:131/238 - (55%) Gaps:20/238 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 NRYRDVNPYDHSRIVLKRGSVD-----YINANLVQLERAE-RQYILTQGPLVDTVGHFWLMVWEQ 122
            |||:.:.|...||:.||..:.:     |||||.::....| :.:|.||||:::||..||.|||::
 Frog   418 NRYKTILPNPVSRVCLKTKNANDALSTYINANYIRGYGGEDKAFIATQGPMINTVNDFWQMVWQE 482

  Fly   123 KSRAVLMLNKLMEKKQIKCHLYWPNEMGADKALKLPHVKLTVELVRLETYQNFVRRWFKLTDLET 187
            ....::|:.||.||.: ||.||||.:.|.     ...|::.|..|:...|.. :|   .||..:.
 Frog   483 DVPVIVMITKLKEKNE-KCVLYWPEKRGI-----YGGVEVLVNSVKECDYYT-IR---NLTLKQG 537

  Fly   188 QQSREVMQFHYTTWPDFGIPSSPNAFLKFLQQVRDSGCLSRDVGPAVVHCSAGIGRSGTF--CLV 250
            .|||.|..:.||:|||...|.|....|:.:..|::........||.||||||||||:|.|  ..:
 Frog   538 SQSRTVKHYWYTSWPDHKTPDSAQPLLQLMLDVQEDRKNFSGRGPVVVHCSAGIGRTGCFISTSI 602

  Fly   251 DCCLVLIDKYGECNVSKVLCELRSYRMGLIQTADQLDFSYQAI 293
            .||  .:::.|..:|..::|:||..|.|::||::|..|.:.|:
 Frog   603 GCC--QLEEKGVVDVLNIVCQLRMDRGGMVQTSEQYQFVHHAL 643

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp61FNP_476687.1 PTPc 34..295 CDD:214550 86/238 (36%)
PTPc 62..295 CDD:238006 86/238 (36%)
ptprrNP_001096479.1 R-PTPc-R 416..641 CDD:350459 85/234 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

Return to query results.
Submit another query.