DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ptp61F and ptprz1

DIOPT Version :9

Sequence 1:NP_476687.1 Gene:Ptp61F / 38160 FlyBaseID:FBgn0267487 Length:548 Species:Drosophila melanogaster
Sequence 2:NP_001362251.1 Gene:ptprz1 / 100125091 XenbaseID:XB-GENE-1011831 Length:2281 Species:Xenopus tropicalis


Alignment Length:415 Identity:116/415 - (27%)
Similarity:178/415 - (42%) Gaps:86/415 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 RFYKEICETCDREAKEKQFS-----------TSESERH-TNRGLNRYRDVNPYDHSRIVL----- 79
            :|.|.:.|...|.....:|.           ||::..| .|:..|||.::..|||||:.|     
 Frog  1676 QFPKHVEELHSRNGFTDEFEEIQNCTADLGITSDNSNHPDNKNKNRYVNIVAYDHSRVKLSQLGE 1740

  Fly    80 KRG-SVDYINANLVQLERAERQYILTQGPLVDTVGHFWLMVWEQKSRAVLMLNKLMEKKQIKCHL 143
            |.| :.||||||.|.....::.||..||||..|...||.|:||.....::|:..|:||.:.||..
 Frog  1741 KEGKATDYINANFVDGYNKQKAYIAAQGPLKSTAEDFWRMLWEHNVEVIVMITNLVEKGRRKCDQ 1805

  Fly   144 YWPNEMGADKALKLPHVKLTVELVRLETYQNFVRRWFKL---TDLETQQSREVMQFHYTTWPDFG 205
            |||:: |:::...........:::...|.:.|:.|..|:   :.......|.|:|:|||.|||.|
 Frog  1806 YWPSD-GSEEYGSFLVTHKNTKVLAYYTVRTFILRNNKIKKGSQKGRHNERTVVQYHYTQWPDMG 1869

  Fly   206 IPSSPNAFLKFLQQVRDSGCLSRDVGPAVVHCSAGIGRSGTFCLVDCCLVLIDKYGECNVSKVLC 270
            :|......|.|:::...:.|...  ||.|||||||:||:||:.::|..|..|...|..|:...|.
 Frog  1870 VPEYTLPVLTFVRKASATKCNGN--GPVVVHCSAGVGRTGTYIVLDSMLKQIQHEGTVNIFGFLK 1932

  Fly   271 ELRSYRMGLIQTADQLDFSYQAIIEGI----------------------------------KKLH 301
            .:||.|..|:||.:|..|.:.|::|.|                                  |.|.
 Frog  1933 HIRSQRNYLVQTEEQYIFIHDALVEAILSRETEVPESHIHGYVNTLLTTGPSGKSRLETQFKLLS 1997

  Fly   302 DPTFLDAEEPLISNDTETHTLDELPPPLPPRVQSLN-----LPLAPNSGGILSLNMRAAQANGAE 361
            :|..|..:..:               .|.|:.:..|     :|:..:..|:.||     ...|.:
 Frog  1998 EPNILQCDYSM---------------ALKPQNRDKNRTSSIIPVERSRVGLSSL-----AGEGTD 2042

  Fly   362 SIGKE--LSKDALNNF-INQHDMIH 383
            .|...  :.....|.| |.||.::|
 Frog  2043 YINASYVMGYHESNQFIITQHPLLH 2067

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp61FNP_476687.1 PTPc 34..295 CDD:214550 94/281 (33%)
PTPc 62..295 CDD:238006 86/241 (36%)
ptprz1NP_001362251.1 alpha_CARP_receptor_like 45..298 CDD:239396
fn3 313..395 CDD:365830
PTP_DSP_cys 1690..1960 CDD:391942 92/272 (34%)
R-PTP-Z-2 2043..2246 CDD:350507 7/25 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.