DRSC/TRiP Functional Genomics Resources

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Protein Alignment indra and CG17803

DIOPT Version :10

Sequence 1:NP_728599.1 Gene:indra / 38159 FlyBaseID:FBgn0035213 Length:733 Species:Drosophila melanogaster
Sequence 2:NP_650657.2 Gene:CG17803 / 42141 FlyBaseID:FBgn0038547 Length:587 Species:Drosophila melanogaster


Alignment Length:541 Identity:101/541 - (18%)
Similarity:180/541 - (33%) Gaps:168/541 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 LPIKICFVCTST------FMSSAALIE-KVRETVDRVQEQPAKKTKVAEIEEPSTQESDKKAVKV 116
            ||..||..|..|      |.:....:: |:|:|.::...|...:...:|:|....:||.::|..|
  Fly   129 LPHHICSTCQETVNKSMEFRAKCQQVDKKLRQTTEKYNIQICDEEMESELENVLYEESAQQAKGV 193

  Fly   117 -----------PKKNTTLRQRSKSIAAFPPSFVNGANTNTEIEIISASPKKLDKTPKKQISRLFE 170
                       |.....|.:....:.|.|..|           .:|.....||:..:|..:....
  Fly   194 VGLEDFSSELLPDSEGVLDEDDFPLDAEPTQF-----------SLSEDELDLDRDTEKDFALEQN 247

  Fly   171 DNLNDSVKLTPAK------EVSSTKKAFLNLFGNGGNDAIEV-------------LTESEEEED- 215
            .:.|:.:.:...|      :|....|.:..:.|. .|...|.             |..|.||:: 
  Fly   248 KSCNEIISIRKCKTKEEIGKVDHGAKVYKVVLGE-YNSLKETAPKYSLSLPKKPQLRVSPEEKNR 311

  Fly   216 --------------SDKGPITI--------------NTNNFQCPECEFHAKFPKPYKE------H 246
                          .||...|.              ...||:||||      ||.:.:      |
  Fly   312 RRRERIQAKPLNYVCDKCGHTFRQRSQLQMHLLRHNRAKNFECPEC------PKKFYDLYTRNIH 370

  Fly   247 LQKEHGLQRPRIYPCTLCIKTFGVLKTLKNHLRDTHSRTFESEAKTKAKESKEKEAKSGAKNKID 311
            ::..|..:.|  :||..|.::|....:...|.||.|                      ||.|:| 
  Fly   371 VRALHKGEHP--FPCNHCNESFANASSRHRHERDVH----------------------GAGNRI- 410

  Fly   312 AKAKETNAVSQRKKPKEKKSKEKKTEIKCNVETKVVDEIDDQVNNKKG----TDSEDADQTQATK 372
                         :.:.|..:|..:...|...||       ...:|||    .:..:..:....|
  Fly   411 -------------RTRVKSKEEGSSRHYCTQCTK-------SYTSKKGLVLHMNFHNGSRPFQCK 455

  Fly   373 IASFKALNESLMKKRMLENVIDSEYTFAINGSSASTPRADSNNFQCEICDCELMTAKQMQEHMKT 437
            |...|..:.|.||:..           |::         |....:|:||....:...|:.:| :.
  Fly   456 ICQMKFADPSAMKRHQ-----------ALH---------DKFPIRCDICLKGFLLRSQLTKH-QD 499

  Fly   438 VHSIDKPKVFKCHVCEKSLATKQSLKTHMT--LHADGAEAPNSSK----RKILQDEDEDVDILGT 496
            ||:...|  .:|.:|:.....:.:|..|..  ||.|..:.....:    ::..:|.|:::|....
  Fly   500 VHTGMHP--HRCEICDVHYRHRYNLNKHKNTDLHRDNMQKAIKEEVNGLQQAFKDIDKEMDFESQ 562

  Fly   497 TQIENTAEKVEGPKKSQQSPT 517
            |.::..|::|....:.:::.|
  Fly   563 TPMQPNAQEVRARTQDEKTQT 583

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
indraNP_728599.1 SUF4-like 418..499 CDD:411020 19/86 (22%)
C2H2 Zn finger 418..439 CDD:411020 5/20 (25%)
C2H2 Zn finger 418..439 CDD:275370 5/20 (25%)
C2H2 Zn finger 449..469 CDD:411020 4/21 (19%)
C2H2 Zn finger 449..469 CDD:275370 4/21 (19%)
CG17803NP_650657.2 zf-AD 86..160 CDD:214871 8/30 (27%)
SUF4-like 320..>376 CDD:411020 12/61 (20%)
C2H2 Zn finger 323..351 CDD:411020 3/27 (11%)
C2H2 Zn finger 326..346 CDD:275368 3/19 (16%)
C2H2 Zn finger 354..375 CDD:411020 7/26 (27%)
C2H2 Zn finger 354..375 CDD:275368 7/26 (27%)
C2H2 Zn finger 383..401 CDD:275368 4/17 (24%)
C2H2 Zn finger 426..446 CDD:275368 6/26 (23%)
C2H2 Zn finger 454..474 CDD:275368 7/30 (23%)
C2H2 Zn finger 481..501 CDD:275368 5/20 (25%)
C2H2 Zn finger 509..528 CDD:275368 4/18 (22%)

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