DRSC/TRiP Functional Genomics Resources

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Protein Alignment indra and pzg

DIOPT Version :10

Sequence 1:NP_728599.1 Gene:indra / 38159 FlyBaseID:FBgn0035213 Length:733 Species:Drosophila melanogaster
Sequence 2:NP_649297.1 Gene:pzg / 40351 FlyBaseID:FBgn0259785 Length:996 Species:Drosophila melanogaster


Alignment Length:758 Identity:143/758 - (18%)
Similarity:245/758 - (32%) Gaps:261/758 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 ITDVLETITHRSIPSSLP--------IKIC---FVCTSTFMSSAALIEKVRETVDRVQ------- 89
            :||:..|.|....|:.|.        :.:|   :|| |...:.....:::...|:||:       
  Fly    96 LTDMCTTHTSTKFPNKLAQLVGEGFLVIVCGEDYVC-SRCTNLVNYYDRLENDVERVKTNLISLL 159

  Fly    90 --------------EQPAKKTK-VAEIEEPSTQESDKKAVKVPKKNTTLRQ-----RSKSIAAFP 134
                          ..|.|..| |......|.:||....:..|:|   |.|     :||......
  Fly   160 NKKYAINEDMGQEGSPPLKMQKMVGGSANRSLEESPSADLLRPRK---LLQGNPVGQSKIAPGTT 221

  Fly   135 PSFVNGANTNTEIEIISASPKKLDKTP----KKQISRLFEDNLNDSVKLTPAKEVSSTKKAF--- 192
            .|.|.|..|      :.....|:.|..    |....|||..:.....:.|  .:..:.:|.|   
  Fly   222 QSSVQGTQT------VQRKATKIYKCTSCDYKTSDMRLFNTHYETCKQQT--FQCKTCRKIFPHF 278

  Fly   193 -----------------------LNLFGNGG-------NDAIEVLTESEEEEDSDKGPIT----- 222
                                   :|......       |.|..||..|.....:...|:.     
  Fly   279 GAMKQHMVRDHNTAMDNTCAMCHINFVNENSLRKHMETNHATNVLVTSTTTIPASAAPVAAAAAA 343

  Fly   223 ---------INTNNFQCPECEFHAKFPKPYKEHLQKEHGLQRPRIYPCTLCIKTFGVLKTLKNHL 278
                     :.|:.:.|..|:|.:.....:.||::| |...:|:.:.|.||              
  Fly   344 AAAAANENLVGTSLYTCNHCQFKSTDKVVFDEHMRK-HAAGKPKPFKCRLC-------------- 393

  Fly   279 RDTHSRTFES-EAKTKAKESKEKEAKSGAKNKIDAKAKETNAVSQRKKPKEKKSKEKKTEIKCNV 342
                |:.||: ||.|                 :.||..:||.                  .||..
  Fly   394 ----SQRFETREAAT-----------------VHAKQHQTNF------------------FKCGT 419

  Fly   343 ETKVVDEIDDQVNNKKGTDSEDADQTQATKIASFKALNESLMKKRMLENVIDSEYTFAINGSSA- 406
            .:....:.:..|.:     .|......|:.::..::::::|..:::|:..||...:.::..|:| 
  Fly   420 CSMTFPKREMLVKH-----FEVHQSPSASTVSPKQSVSQNLNTQKLLQETIDEALSDSLPASTAA 479

  Fly   407 --STPRADSN--NFQCEICDCELMTAKQMQEHMKTVHSIDKPKVFKCHVCEKSLATKQSLKTHMT 467
              :|..:::|  .|.|.||....:.......||:| |..||.            ||         
  Fly   480 VVATTESENNIRFFSCSICSLTFIQETYYNHHMET-HRRDKK------------AT--------- 522

  Fly   468 LHADGAEAPNSSKRKILQDE---------DEDVDILGTTQIENTAEKVEGPK-KSQQSPTKAAKF 522
              :.||.|.||:...:|.||         ||..:......||:..||:...| :|.::|...:|.
  Fly   523 --SAGATALNSAATALLSDEPGEATGKAGDESGEQNAEADIESLFEKLHSDKNESGEAPKPGSKG 585

  Fly   523 TNRKILQEEDEVVEIVDAFKTDNTAEDDEGPAEEKIIRSRNNIQHQVDGGMIAPRSPAKKTKKTS 587
            ....|                  |:::..|..      :.|....|.||......||    ..|:
  Fly   586 GEMVI------------------TSQEGSGGI------TFNITIPQPDGDQSQKDSP----NTTA 622

  Fly   588 HVDLSV-----------STTNGNSPAKSEKRK------KQDKSEDTLPSSDVDIVEEINYNVRPH 635
            .|.:|:           |.:.|:..||.|..:      |.:.:..::||.|.|           :
  Fly   623 PVSVSIDMPNLDQAEDESQSQGSIDAKGESGEASSADSKSNAAPVSMPSLDDD-----------N 676

  Fly   636 KKARLESIGDSTADESTLSCDRCGKFVKSRQRLDSHMEKKHAA 678
            :.|..|    :.|.|.|.:..:.|: .|::.:.....:.|.||
  Fly   677 EAAAAE----AEASEETKTASKAGQ-EKAKAKAGESAKSKEAA 714

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
indraNP_728599.1 SUF4-like 418..499 CDD:411020 21/89 (24%)
C2H2 Zn finger 418..439 CDD:411020 6/20 (30%)
C2H2 Zn finger 418..439 CDD:275370 6/20 (30%)
C2H2 Zn finger 449..469 CDD:411020 2/19 (11%)
C2H2 Zn finger 449..469 CDD:275370 2/19 (11%)
pzgNP_649297.1 C2H2 Zn finger 241..263 CDD:275371 4/21 (19%)
C2H2 Zn finger 268..289 CDD:275371 2/20 (10%)
C2H2 Zn finger 297..318 CDD:275371 1/20 (5%)
C2H2 Zn finger 360..380 CDD:275368 6/20 (30%)
zf-H2C2_2 373..399 CDD:463886 10/44 (23%)
C2H2 Zn finger 390..410 CDD:275368 11/54 (20%)
C2H2 Zn finger 417..437 CDD:275368 3/24 (13%)

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