DRSC/TRiP Functional Genomics Resources

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Protein Alignment indra and hang

DIOPT Version :10

Sequence 1:NP_728599.1 Gene:indra / 38159 FlyBaseID:FBgn0035213 Length:733 Species:Drosophila melanogaster
Sequence 2:NP_001138204.1 Gene:hang / 32613 FlyBaseID:FBgn0026575 Length:2223 Species:Drosophila melanogaster


Alignment Length:826 Identity:151/826 - (18%)
Similarity:263/826 - (31%) Gaps:300/826 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 TVDRVQEQPAKKTKVAEIEEPSTQES----DKKAVKVPKKNTTL--------RQRSKSIAAFPPS 136
            |:|..:|:|....|...:::.|...|    ..:..:.|..|...        ..||...|:   :
  Fly  1138 TLDDEEEEPGSVAKKMRLDDSSNNSSLVGVASQQKECPICNAVFSNNIGLSNHMRSHYTAS---N 1199

  Fly   137 FVNGANTNTEIEIISASPKKLDKTPKKQISRLFEDNLNDSVKLTPAKEVSSTKKAFLNLFGNGGN 201
            .||.|        ::|:.:   .|||..           ::..|||.:         :..|.|| 
  Fly  1200 AVNAA--------LAAANR---MTPKSL-----------TITATPATD---------SELGVGG- 1232

  Fly   202 DAIEVLTESEEEEDSDKGPITINT--------------------NNFQCPECEFHAKFPKPYKEH 246
                .::||.....::..|...|.                    ...:|..|:......|.|:.|
  Fly  1233 ----TMSESAPATPANVPPAMANQTPQEQAVFRRSLDQAADRRFRRMRCRICQRRFSSKKSYRYH 1293

  Fly   247 LQKEHGLQRPRIYPCTLCIKTFGVLKTLKNHLRDTHSRTFESEAKTKAKE--------SKEKEAK 303
            :..:|.:|..:...|.||...|...|.||.||...|.:..:.|...|..|        |.|.|.:
  Fly  1294 MLTDHQVQNVQFIKCKLCNAEFAYEKGLKVHLFKVHGKAIKDEMIIKQFECDVCSIVYSSESELQ 1358

  Fly   304 SGAKNKIDAKAKETNAVSQRKKPKEKKSKEKKTEIKCNVETKVVDEIDDQ--VNNKKGTDSEDAD 366
                                   :.|:|..|.|....:.......:|||.  :::.|.|.|:.||
  Fly  1359 -----------------------QHKRSVHKLTSASASTSASTSSKIDDDSLMDDGKPTSSDLAD 1400

  Fly   367 QTQATKIASFKALNESLMKKRMLENVIDSEYTFAINGSSASTPRADSNNFQCEICDCELMTAKQM 431
            .:                             |.|..||:||.|   ...:||:.|.....|.|::
  Fly  1401 LS-----------------------------TLAAGGSTASAP---LYWYQCKYCPSNFNTNKKL 1433

  Fly   432 QEHMKT-------------------------VHSIDK----PKVFKCHVCEKSLATKQSLKTH-- 465
            ..|:.:                         ||...|    |...:|.:|.|....:|....|  
  Fly  1434 AIHINSHDEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPQVPNPAECSLCRKVFFDRQMHDNHTP 1498

  Fly   466 ----MTLHADGA--------EAPNSSKRKILQ------DEDEDVD-------------------- 492
                ..:.:.||        .:.:::||.|.:      |::||.|                    
  Fly  1499 TCNRKPITSTGAHQQQDGQLHSHHTAKRTIFRHKTGDDDDEEDDDEQQQLEERANSDGNGTTVGV 1563

  Fly   493 ILGTTQIENTAEKVEGPKKSQQSPTKAAKFTNR----KILQEEDEVVEIVDAFKTDN--TAEDDE 551
            ..|:|....|:.|:..|:.:  .....|:||::    |.:|:.::.:.:      ||  .|..|:
  Fly  1564 ASGSTAAAGTSLKIRIPEVA--CTICGARFTDQEHFSKHIQKHEQELYV------DNPLAAMFDD 1620

  Fly   552 GPAEEKIIRSRNNIQHQVDGGMIA--------PRSPAKKTKKTSH---------VDLSVS----- 594
            |||:    ..:..::.|.:.|..|        |:..|.|..:..|         :|...:     
  Fly  1621 GPAD----AGQFQVERQNENGEYACDLCAKTFPQVIALKVHRKWHFRGDSKQNPIDGEATQLTNN 1681

  Fly   595 --TTNGNSPAKSEKRK---------KQDKSEDTLPSSDVDIVEEINYNVRPHKKARLESIGDSTA 648
              |||.|:......|:         :|.:|.:...:|.::           |......:...|..
  Fly  1682 NHTTNNNNNNSMHLRELHAVGLMPNQQQQSLNNSCNSSMN-----------HNNNSSSNRSKSMK 1735

  Fly   649 DESTLSCDRCGKFVKSRQRLDSHMEKKHAAK---------------LQCTLCKEVYQNQMDYVAH 698
            .:..|.|:.|.....|...|..||.:.|..:               |.|..|:..:..:..::.|
  Fly  1736 RKRELKCEYCASTFISNNNLRRHMYELHKHEVSNLPEPPVIVVDDHLTCRRCQLKFDTKELWIEH 1800

  Fly   699 ----------FSNCGSEGGLP-CG--VANCKKVFTEANFLSSHLRK 731
                      |  |..:.|.. ||  ::..:|:.   |.:::||::
  Fly  1801 KLADAKVVRPF--CPFQWGCDLCGEYLSRKEKLM---NHINNHLKE 1841

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
indraNP_728599.1 SUF4-like 418..499 CDD:411020 25/149 (17%)
C2H2 Zn finger 418..439 CDD:411020 5/45 (11%)
C2H2 Zn finger 418..439 CDD:275370 5/45 (11%)
C2H2 Zn finger 449..469 CDD:411020 5/25 (20%)
C2H2 Zn finger 449..469 CDD:275370 5/25 (20%)
hangNP_001138204.1 zf-AD 80..154 CDD:462262
C2H2 Zn finger 1036..1057 CDD:275368
C2H2 Zn finger 1067..1088 CDD:275368
C2H2 Zn finger 1279..1298 CDD:275371 4/18 (22%)
C2H2 Zn finger 1308..1325 CDD:275371 7/16 (44%)
C2H2 Zn finger 1420..1440 CDD:275368 5/19 (26%)
C2H2 Zn finger 1450..1468 CDD:275368 2/17 (12%)
Blue background indicates that the domain is not in the aligned region.

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