DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2199 and CG12219

DIOPT Version :9

Sequence 1:NP_728599.1 Gene:CG2199 / 38159 FlyBaseID:FBgn0035213 Length:733 Species:Drosophila melanogaster
Sequence 2:NP_572312.1 Gene:CG12219 / 31572 FlyBaseID:FBgn0043796 Length:562 Species:Drosophila melanogaster


Alignment Length:580 Identity:107/580 - (18%)
Similarity:190/580 - (32%) Gaps:144/580 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   161 PKKQISRLFEDNL------NDSVKLTPAKEVSSTKKAFLNLFG--------------------NG 199
            |:..:.:|...:|      :|::......|..|..::|.|.:.                    |.
  Fly    40 PESYLVQLISIHLYLCLSRDDAISTCICTECCSQLESFHNFWKLVELKQTTLCSQFLAIDCDVNW 104

  Fly   200 GNDAIEVLTESEEE---EDSDKGPITINT--NNFQCPECEFHAKFPKPYKEHLQKEHGLQRPRIY 259
            ..|..|...:::.:   |.:::..:...|  |.|.|..||...|..:..:||:....| .||  .
  Fly   105 SEDGSETQLDAQPQLLLEPAEEPKVVTPTTANKFPCMFCEKSFKMRRYLEEHIATHTG-DRP--I 166

  Fly   260 PCTLCIKTFGVLKTLKNHLRDTHSRTFESEAKTKAKESKEKEAKSGAKNKIDAKAKETNAVSQRK 324
            .|..|...|.....:..|::..|:..:     .||:|.:: .|||   |:.....:||.......
  Fly   167 ACPYCEMAFRCRSNMYTHVKSKHTTQW-----LKAREERD-AAKS---NQNHTTPEETAPAVLVP 222

  Fly   325 KPKEKKSKEKKTEIKCNVETKVVDEIDDQVNNKKGTDSEDADQTQATKIASFKALNESLMKKRML 389
            .|....:.........:....|         |...|.:..:..|..|.:|:....:...:::..|
  Fly   223 VPAPAPALASAPASSASPGNTV---------NPAATATPASSATPTTNLAAAPLPSPPTVQQLPL 278

  Fly   390 ENVIDSEYTFAINGSSASTPRADSNNFQCEICDCELMTAKQMQEHMKTVHSIDKPKVFKCHVCEK 454
             :||.|:.:.|:|.:...||.:.|..            ::......|| ||   ||..:      
  Fly   279 -SVIKSQPSEAMNLTITKTPPSGSRG------------SRNRSSRRKT-HS---PKKVQ------ 320

  Fly   455 SLATKQSLKTHMTLHADGAEAPNSSKRKILQDEDEDVDILGTTQIENTAEKVEGPKKSQQSPTKA 519
                          |.:|::         :.|||                          ||.|.
  Fly   321 --------------HTEGSD---------VSDED--------------------------SPQKR 336

  Fly   520 AKFTNRKILQEEDEV-VEIVDAFKTDNTAEDDEGPAEEKIIRSRNNIQH--QVDGGMIAPRSPAK 581
            .| .|..||...:.| ..:|.|..............::::..|....||  |:...|.|..:.|.
  Fly   337 LK-ENELILANYNAVAAAVVAAASLTGNPPGQPDSLQQRLCASLLQQQHQEQLFAVMSATAAAAA 400

  Fly   582 KTKKTSHVDLSVSTTN-------GNSPAKSEKRKKQDKSEDTLPSSDVDIVEEINYNVRPHKKAR 639
            ....:|....:.:||.       ||.|.....::.....:..:.::.|.|:.. |....|.:..|
  Fly   401 AVGTSSATTTTTTTTGTMMAHPYGNHPPSETDKRPAAPLQAVIHAAPVSIICP-NCGELPGQNHR 464

  Fly   640 LESIGDSTADESTLSCDRCGKFVKSRQRLDSHMEKKHAAKLQ-CTLCKEVYQNQMDYVAH 698
            ..|       :...:||.|||..|.::.|:.|.......||. |..|...::::.:...|
  Fly   465 CLS-------KPKYACDVCGKSFKMKRYLEEHFATHTGVKLHTCAFCPTEFRSKSNMYHH 517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2199NP_728599.1 C2H2 Zn finger 418..439 CDD:275370 2/20 (10%)
C2H2 Zn finger 449..469 CDD:275370 0/19 (0%)
CG12219NP_572312.1 zf-AD 2..94 CDD:285071 8/53 (15%)
C2H2 Zn finger 140..160 CDD:275368 6/19 (32%)
COG4049 149..204 CDD:226535 13/63 (21%)
C2H2 Zn finger 168..186 CDD:275368 4/17 (24%)
C2H2 Zn finger 473..493 CDD:275370 8/19 (42%)
C2H2 Zn finger 501..522 CDD:275370 3/17 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45439990
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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