DRSC/TRiP Functional Genomics Resources

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Protein Alignment indra and Zfp553

DIOPT Version :10

Sequence 1:NP_728599.1 Gene:indra / 38159 FlyBaseID:FBgn0035213 Length:733 Species:Drosophila melanogaster
Sequence 2:NP_666313.1 Gene:Zfp553 / 233887 MGIID:2384725 Length:591 Species:Mus musculus


Alignment Length:607 Identity:109/607 - (17%)
Similarity:191/607 - (31%) Gaps:192/607 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   196 FGNGGNDAIEVLTESEEEEDSDKGPITINTNNFQCPECEFHAKFPKPYKEHLQKEHGLQRPRIYP 260
            :|.|.||...|                       |.||....:......:| |:.|..::|  |.
Mouse    74 WGQGSNDRAAV-----------------------CGECGKSFRQMSDLVKH-QRTHTGEKP--YK 112

  Fly   261 CTLCIKTFGVLKTLKNHLRDTHSRTFESEAKTKAKESKEKEAKSGAKNKIDAKAKETNAVSQRKK 325
            |.:|.|.||     .:..|..|.||...|...:.:.......|. .:::|.|..:.|......|.
Mouse   113 CGVCGKGFG-----DSSARIKHQRTHTGEKAYRVRPPAPGPPKM-PRSRIPAGERPTICGECGKS 171

  Fly   326 PKEKKS--KEKKTE-----IKCNVETKVVDEIDDQVNNKKGTDSEDADQ--------TQATKIAS 375
            .::...  |.::|.     .||.:..|...:...::.:::   :...||        .|.:..|.
Mouse   172 FRQSSDLVKHQRTHTGEKPYKCGICGKGFGDSSARIKHQR---THRGDQLPRPVVPRRQPSPAAP 233

  Fly   376 FKALNESLMKKRMLENVIDSEYTFAINGSSASTPRA--DSNNFQCEICDCELMTAKQMQEHMKTV 438
            ..........|..:  ..|....|.::.|..|..|:  ....|.|::|..|......:.:|:: |
Mouse   234 AAPHRPKAQDKPYI--CTDCGKRFVLSCSLLSHQRSHLGPKPFGCDVCGKEFARGSDLVKHLR-V 295

  Fly   439 HSIDKPKVFKCHVCEKSLATKQSLKTHMTLHADGAEAPNSS--------------KRKILQDEDE 489
            |:.:||  :.|..|.|..|...:...|:..|:  .:.|::.              :.::...|.:
Mouse   296 HTGEKP--YLCPECGKGFADSSARVKHLRTHS--GQRPHACPECNRSFSLSSTLLRHRLTHVEPQ 356

  Fly   490 DVDI----------------LGTTQIENTAEKVEGPKKSQQSPTKAAKFTNRKILQEEDEVVEIV 538
            |..:                |||:           |..:.:||:.::.                 
Mouse   357 DFSLAAYPVVPLIPSPPPPPLGTS-----------PSLTPRSPSHSSD----------------- 393

  Fly   539 DAFKTDNTAEDDEGP---------AEEK----------IIRSRNNIQ-HQVDGG---MIAP---R 577
            ..|.......:..||         |.:|          ..||.:.:: |:|..|   .:.|   :
Mouse   394 GPFGLPGLEPEPGGPQAGEPPPPLAGDKPHKCPECGKGFRRSSDLVKHHRVHTGEKPYLCPECGK 458

  Fly   578 SPAKKTKKTSHVDLSVSTTNGNSPAKSEKRKKQDKSEDTL-----PSSDVDIVEEINYNVRPHKK 637
            ..|..:.:..|    :.|..|       :|.:......||     |...|.||.:.....||...
Mouse   459 GFADSSARVKH----LRTHQG-------ERTRPPPPPSTLLRPHNPPGSVPIVPQSRVQGRPSGP 512

  Fly   638 ARLESIGDSTADESTLSCDRCGK-------FVKSRQRLDSHMEKKHAAKLQCTLCKEVYQNQMDY 695
            ::|.            .|..|||       .||.|:   :|..:|   ..:|..|.:.:.:....
Mouse   513 SQLH------------VCGFCGKEFPRSSDLVKHRR---THTGEK---PYKCAECGKGFGDSSAR 559

  Fly   696 VAHFSNCGSEGGL---PCGVAN 714
            :.|     ..|.|   |.||.:
Mouse   560 IKH-----QRGHLALKPFGVGD 576

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
indraNP_728599.1 SUF4-like 418..499 CDD:411020 20/110 (18%)
C2H2 Zn finger 418..439 CDD:411020 4/20 (20%)
C2H2 Zn finger 418..439 CDD:275370 4/20 (20%)
C2H2 Zn finger 449..469 CDD:411020 5/19 (26%)
C2H2 Zn finger 449..469 CDD:275370 5/19 (26%)
Zfp553NP_666313.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..24
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 55..80 2/5 (40%)
zf-C2H2 84..105 CDD:395048 6/44 (14%)
C2H2 Zn finger 85..105 CDD:275368 5/20 (25%)
zf-H2C2_2 97..120 CDD:463886 8/25 (32%)
C2H2 Zn finger 113..133 CDD:275368 8/24 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 131..160 6/29 (21%)
COG5048 161..572 CDD:227381 80/482 (17%)
C2H2 Zn finger 165..185 CDD:275368 2/19 (11%)
C2H2 Zn finger 193..213 CDD:275368 2/22 (9%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 206..241 4/37 (11%)
C2H2 Zn finger 248..268 CDD:275368 5/19 (26%)
C2H2 Zn finger 276..296 CDD:275368 4/20 (20%)
C2H2 Zn finger 304..324 CDD:275368 5/19 (26%)
C2H2 Zn finger 332..352 CDD:275368 0/19 (0%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 372..429 11/84 (13%)
C2H2 Zn finger 425..445 CDD:275368 3/19 (16%)
C2H2 Zn finger 453..538 CDD:275368 22/110 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 464..512 12/58 (21%)
C2H2 Zn finger 546..566 CDD:275368 3/24 (13%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 564..591 5/13 (38%)
Blue background indicates that the domain is not in the aligned region.

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