DRSC/TRiP Functional Genomics Resources

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Protein Alignment Myo61F and MYO1

DIOPT Version :10

Sequence 1:NP_476934.2 Gene:Myo61F / 38153 FlyBaseID:FBgn0010246 Length:1052 Species:Drosophila melanogaster
Sequence 2:NP_011888.1 Gene:MYO1 / 856418 SGDID:S000001065 Length:1928 Species:Saccharomyces cerevisiae


Alignment Length:1057 Identity:326/1057 - (30%)
Similarity:527/1057 - (49%) Gaps:156/1057 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 FVLLEN-----YQSEEAFIGNLKKRFQEDLIYTYIGQVLISVNPYKQLPIYTDDHVKAYRNKH-- 99
            |..:||     :.:|.:.:.||:||:..||||||.|..|:::|||..|.:|::||:..|.|||  
Yeast    74 FDKVENMSELTHLNEPSVLYNLEKRYDCDLIYTYSGLFLVAINPYHNLNLYSEDHINLYHNKHNR 138

  Fly   100 ----------FYEMPPHIFAVTDNAFRSLIEENRGQCVLISGESGSGKTEASKKVLQFIAA-CSG 153
                      ..::||||||:.:.|:.:|:.|.:.|.:|::||||:||||.:||:||::|: .||
Yeast   139 LSKSRLDENSHEKLPPHIFAIAEEAYENLLSEGKDQSILVTGESGAGKTENTKKILQYLASITSG 203

  Fly   154 N---------QTTVEGVKDKLLKSNPVLEAFGNAKTNRNDNSSRFGKYMDIQFDFKGAPIGGNIL 209
            :         .:.||..:.|:|:|||:||:||||:|.||:|||||||::.|:|:..|...|.:|.
Yeast   204 SPSNIAPVSGSSIVESFEMKILQSNPILESFGNAQTVRNNNSSRFGKFIKIEFNEHGMINGAHIE 268

  Fly   210 NYLLEKSRVVAQMGGERNFHIFYQLLAGADEALLQELRLE-RALDTYSYLTDGLNGTVTRINDAD 273
            .|||||||:|.|...|||:|||||||:|.|::.|:.|||: |.:..|..|::.....:..|||.:
Yeast   269 WYLLEKSRIVHQNSKERNYHIFYQLLSGLDDSELKNLRLKSRNVKDYKILSNSNQDIIPGINDVE 333

  Fly   274 SFKQVQQALTVIDFTKEEQREIFGIVASILHLGNVGFTEVEGNAKVNSRDLVVTAARLLGVNASE 338
            :||::..||.:|.|:|::.|.||.:||.||.:||:.|............|:....:. |||:..:
Yeast   334 NFKELLSALNIIGFSKDQIRWIFQVVAIILLIGNIEFVSDRAEQASFKNDVSAICSN-LGVDEKD 397

  Fly   339 LEAALTHRTIDARGDVVTSPLNQELAIYARDALAKAVYDRLFSWLVQRLNISLQAKETRASRNNV 403
            .:.|:......|..:.|:...|.:.|.:..:||::.:|:|||.::|..:|.:|   :..::..|.
Yeast   398 FQTAILRPRSKAGKEWVSQSKNSQQAKFILNALSRNLYERLFGYIVDMINKNL---DHGSATLNY 459

  Fly   404 MGILDIYGFEIFQKNSFEQFCINFCNEKLQQLFIELTLKSEQDEYRREGIEWIPVEY-FDNKVIC 467
            :|:|||.|||||:.|||||.|||:.||||||.|.......||.||.:|.|:|..::| .|.::..
Yeast   460 IGLLDIAGFEIFENNSFEQLCINYTNEKLQQFFNNHMFVLEQSEYLKENIQWDYIDYGKDLQLTI 524

  Fly   468 NLIEEK--HKGIISILDEECLRPGEPTDKTFLEKLTQKLAQHHHYVCHEKAPAHIKKIMLRDEFR 530
            :|||.|  ..|::.:||||.:.| :.||::|..||.....|:         .:..|:..|::.|.
Yeast   525 DLIESKGPPTGVLPLLDEEAVLP-KSTDESFYSKLISTWDQN---------SSKFKRSRLKNGFI 579

  Fly   531 LVHYAGEVTYSVNGFLDKNNDLLFRDLKETLSKAGNGIVRNCF-PEKELRS------------LK 582
            |.||||:|.|:|.|:|.||.|.|..:|...||.:.|.|:...| ||.|..|            :|
Yeast   580 LKHYAGDVEYTVEGWLSKNKDPLNDNLLSLLSSSQNDIISKLFQPEGEKSSSAGVEANISNQEVK 644

  Fly   583 RP------ETAITQFRASLNNLMDILMCKEPSYIRCIKPNDLQTANVFNDELVLHQVKYLGLMEN 641
            :.      :|..::.|.....|::.|....|.::|||.||:::....||..|:|.|::..|::|.
Yeast   645 KSARTSTFKTTSSRHREQQITLLNQLASTHPHFVRCIIPNNVKKVKTFNRRLILDQLRCNGVLEG 709

  Fly   642 LRVRRAGFAYRRTYELFLERYKSL----SKSTWPNYKGPGGPKAGVQQLVKDLGWDEEKYRVGET 702
            :|:.|.|:..|..::.|.:||:.|    |.:|..:.|.....|...:.|:..|..|.:.|::|.|
Yeast   710 IRLAREGYPNRIAFQEFFQRYRILYPENSTTTTFSSKLKASTKQNCEFLLTSLQLDTKVYKIGNT 774

  Fly   703 KLFIRWPRTLFDTEDAYQEKKHEIAAIIQAHWKGLMQRRKYL----KLRAQVIIMQSY-CRRKLA 762
            |||.: ...|.|.|.....|.:.|...:.|..:|...|::..    ||:...:|..:: ...:|.
Yeast   775 KLFFK-AGVLADLEKQKDVKLNNIMIKLTATIRGYTVRKEITYHLQKLKKTRVIGNTFRLYNRLV 838

  Fly   763 QQ---------------------AAKKRREAADKIRAFI------KGFI------TRNDAPNG-- 792
            ::                     ..||..|..:|::..:      |.|:      |.|:..|.  
Yeast   839 KEDPWFNLFIRIKPLLTSSNDMTRTKKFNEQINKLKNDLQEMESKKKFLEEKNQKTVNELENTQD 903

  Fly   793 -FNEEFIANAKRMWLLRLAKELPTKVLDKSWPHAPGHCEEAS----GILHRLHRLHLARIYRLKL 852
             .|:|.....|...||...| ..::.|.|.:.......:|.|    .:...|...|      .|:
Yeast   904 LLNQEKENLRKNESLLNRVK-TSSETLQKQFDDLVSEKDEISREKLEVAQNLEEAH------QKI 961

  Fly   853 TPQQKRQFELKVLAEKVFKGKKNNYASSVS-------------TWFQEDRIPKEH-IQRVNDFVA 903
            ...|:...|.:...||: ..|.|.....:|             :..:|.::..|: |:|:.|.:.
Yeast   962 QGLQETIREREATLEKL-HSKNNELIKQISDLNCDISKEQSSQSLIKESKLKLENEIKRLKDVIN 1025

  Fly   904 STFGSEQLKYQSFCTKFDRHGYKSRDRFILLSNKAIYVLDGKTYKQKHRLPLDKIDFTLTNHNDD 968
            |.  .|::|  ||..|             |.|::....:...|.::...:.:.::. :|...|.|
Yeast  1026 SK--EEEIK--SFNDK-------------LSSSEEDLDIKLVTLEKNCNIAMSRLQ-SLVTENSD 1072

  Fly   969 LMVIRIPLDLKKDKGDL 985
            |....  .:.||:|..|
Yeast  1073 LRSKN--ENFKKEKAAL 1087

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myo61FNP_476934.2 MYSc_Myo1 52..707 CDD:276829 259/703 (37%)
Myosin_TH1 863..1049 CDD:461801 27/137 (20%)
MYO1NP_011888.1 COG5022 2..1691 CDD:227355 326/1057 (31%)
Smc 1607..>1901 CDD:440809
Blue background indicates that the domain is not in the aligned region.

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