DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Myo61F and XIC

DIOPT Version :10

Sequence 1:NP_476934.2 Gene:Myo61F / 38153 FlyBaseID:FBgn0010246 Length:1052 Species:Drosophila melanogaster
Sequence 2:NP_172349.2 Gene:XIC / 837394 AraportID:AT1G08730 Length:1538 Species:Arabidopsis thaliana


Alignment Length:1008 Identity:324/1008 - (32%)
Similarity:517/1008 - (51%) Gaps:124/1008 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 ERDRAGVQDFVLLENYQSEEAFIGNLKKRFQEDLIYTYIGQVLISVNPYKQLPIYTDDH-VKAYR 96
            |....||.|...| :|..|...:.|||.|::.:.||||.|.:||::||:::||...|.| ::.|:
plant    66 EAPAGGVDDMTKL-SYLHEPGVLQNLKIRYELNEIYTYTGNILIAINPFQRLPHIYDAHMMQQYK 129

  Fly    97 NKHFYEMPPHIFAVTDNAFRSLIEENRGQCVLISGESGSGKTEASKKVLQFIAACSGNQTTVEG- 160
            .....|:.||:|||.|.|:|::|.|.:...:|:|||||:||||.:|.:::::|...|...| || 
plant   130 GAPLGELSPHVFAVADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRAVT-EGR 193

  Fly   161 -VKDKLLKSNPVLEAFGNAKTNRNDNSSRFGKYMDIQFDFKGAPIGGNILNYLLEKSRVVAQMGG 224
             |:.::|:|||||||||||||.||:|||||||:::||||.:|...|..|..||||:|||......
plant   194 TVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKQGRISGAAIRTYLLERSRVCQISDP 258

  Fly   225 ERNFHIFYQLLAGADEALLQELRLERALDTYSYLTDGLNGTVTRINDADSFKQVQQALTVIDFTK 289
            |||:|.|| ||..|.:..:::.:|... .|:.||.......:..|:||..:...::|:.::..::
plant   259 ERNYHCFY-LLCAAPQEEIEKYKLGHP-KTFHYLNQSKCFELVGISDAHDYLATRRAMDIVGISE 321

  Fly   290 EEQREIFGIVASILHLGNVGFT---EVEGNAKVN--SRDLVVTAARLLGVNASELEAALTHRTID 349
            :||..||.:||:|||:||:.||   ||:.:...:  |:..:.|||.||..:...||.||..|.:.
plant   322 KEQEAIFRVVAAILHIGNIDFTKGKEVDSSVPKDEKSKFHLKTAAELLMCDLKALEDALCKRVMI 386

  Fly   350 ARGDVVTSPLNQELAIYARDALAKAVYDRLFSWLVQRLNISLQAKETRASRNNVMGILDIYGFEI 414
            ...:|:...|:.:.|:.:||.|||.||.|||.|||.::|.|:...   |:..:::|:|||||||.
plant   387 TPEEVIKRSLDPQSAVTSRDGLAKTVYSRLFDWLVDKINKSIGQD---ANSRSLIGVLDIYGFES 448

  Fly   415 FQKNSFEQFCINFCNEKLQQLFIELTLKSEQDEYRREGIEWIPVEYFDNKVICNLIEEKHKGIIS 479
            |:.||||||||||.||||||.|.:...|.||:||.:|.|:|..:|:.||:.:.:|||:|..||::
plant   449 FKTNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEAIDWSYIEFVDNQDVLDLIEKKPGGIVA 513

  Fly   480 ILDEECLRPGEPTDKTFLEKLTQKLAQHHHYVCHEKAPAHIKKIMLRDEFRLVHYAGEVTYSVNG 544
            :|||.|:.| :.|.:||..||.|....|..:         ||..:.|.:|.:.||||||.|....
plant   514 LLDEACMFP-KSTHETFANKLYQTFKTHKRF---------IKPKLSRTDFAVAHYAGEVLYQSEL 568

  Fly   545 FLDKNNDLLFRDLKETLSKAGNGIVRNCF---PEKELRSLKRPETAITQFRASLNNLMDILMCKE 606
            |||||.|.:..:.::.|..:....|...|   ||:..:|.|..... ::|:..|..||:.|.|.|
plant   569 FLDKNKDYVIPEHQDLLGASKCPFVVGLFPPLPEETSKSSKFSSIG-SRFKLQLQQLMETLNCTE 632

  Fly   607 PSYIRCIKPNDLQTANVFNDELVLHQVKYLGLMENLRVRRAGFAYRRTYELFLERYKSLSKSTWP 671
            |.||||:|||:|....:|.:..::.|::..|::|.:|:..||:..|:.:..|:.|:..||.:.  
plant   633 PHYIRCVKPNNLLKPAIFENVNIMQQLRCGGVLEAIRISCAGYPTRKPFFEFINRFGLLSPAA-- 695

  Fly   672 NYKGPGGPKAGVQQLVKDLGWDEEKYRVGETKLFIRWPRTLFDTEDAYQEKKHEIAAIIQAHWKG 736
             .:|....|...|:::.::|.  :.|::|:||:|:| ...:.:.:....|.....|..||...:.
plant   696 -LEGNFDEKVACQKILDNMGL--KGYQIGKTKVFLR-AGQMAELDARRAEVLSSAAKKIQRRIRT 756

  Fly   737 LMQRRKYLKLRAQVIIMQSYCRRKLA-QQAAKKRREAAD-KIRAFIKGFITRNDAPNGFNEEFIA 799
            ...:::::.||...|.:|:.||.:|: :.....|||||. ||:            .||.......
plant   757 HQAQKRFIVLRKATISLQAICRGRLSCKHYDNLRREAAAVKIQ------------KNGRRHYSRK 809

  Fly   800 NAKRMWLLRLAKELPTKVLDKSWPHAPGHCEEASGILHRLHRLHLARIYRLKLTPQQKRQFELKV 864
            :.|::.:..|..:...:.:............:|:.|:....|.|.|..|..||            
plant   810 SYKKLHVASLVVQTGLRAMAARKQFRFRKQTKAATIVQAQWRCHRAISYYKKL------------ 862

  Fly   865 LAEKVFKGKKNNYASSVSTWFQEDRIPKEHIQRVNDFVASTFGS------------EQLKYQSFC 917
                     ||....|.:.|  ..|:.|..::::. ..|...|:            |:|.|    
plant   863 ---------KNGVVLSQTRW--RGRLAKRELRKLK-MAARETGALKEAKDMLEKKVEELTY---- 911

  Fly   918 TKFDRHGYKSRDRFILLSNKAIYVLDGKTYKQKHRLPLDKIDFTLTNH----------------- 965
                |...:.|.|..|...|...:|..|:..::.|..:|:.:..|...                 
plant   912 ----RVQLEKRSRGDLEEAKTQEILKLKSSFEEMRKKVDETNALLLKEREAAKKAAEEAPPVIKE 972

  Fly   966 --------------NDDLMVIRIPLDLKKDKGD 984
                          .::|..:::.|:.:|.:.|
plant   973 TQILVEDTKKIELMTEELESVKVTLENEKQRAD 1005

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myo61FNP_476934.2 MYSc_Myo1 52..707 CDD:276829 261/665 (39%)
Myosin_TH1 863..1049 CDD:461801 25/165 (15%)
XICNP_172349.2 Myosin_N 16..60 CDD:460670
MYSc_Myo11 84..728 CDD:276835 261/665 (39%)
DUF5401 <747..1058 CDD:375164 54/303 (18%)
MyosinXI_CBD 1119..1504 CDD:271259
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.