DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Myo61F and ATM1

DIOPT Version :10

Sequence 1:NP_476934.2 Gene:Myo61F / 38153 FlyBaseID:FBgn0010246 Length:1052 Species:Drosophila melanogaster
Sequence 2:NP_001154628.2 Gene:ATM1 / 821534 AraportID:AT3G19960 Length:1176 Species:Arabidopsis thaliana


Alignment Length:975 Identity:325/975 - (33%)
Similarity:493/975 - (50%) Gaps:170/975 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 GVQDFVLLENYQSEEAFIGNLKKRFQEDLIYTYIGQVLISVNPYKQLPIYTDDHVKAYRNKHFYE 102
            ||.|.:.| :|.:|.:.:.||..|:.:|:|||..|.||::|||:|::|:|.:.:::|||.|.  .
plant   166 GVDDLMQL-SYLNEPSVLYNLNYRYNQDMIYTKAGPVLVAVNPFKEVPLYGNRYIEAYRKKS--N 227

  Fly   103 MPPHIFAVTDNAFRSLIEENRGQCVLI----------------SGESGSGKTEASKKVLQFIAAC 151
            ..||::|:.|.|.|.:|.:...|.::|                |||||:||||.:|..:|::||.
plant   228 ESPHVYAIADTAIREMIRDEVNQSIIIRCICIHESMTYSISSSSGESGAGKTETAKIAMQYLAAL 292

  Fly   152 SGNQTTVEGVKDKLLKSNPVLEAFGNAKTNRNDNSSRFGKYMDIQFDFKGAPIGGNILNYLLEKS 216
            .|.    .|::.::||:||:|||||||||.||||||||||.::|.|...|...|..|..:|||||
plant   293 GGG----SGIEYEILKTNPILEAFGNAKTLRNDNSSRFGKLIEIHFSESGKISGAQIQTFLLEKS 353

  Fly   217 RVVAQMGGERNFHIFYQLLAGADEALLQELRLERALDTYSYLTDGLNGTVTRINDADSFKQVQQA 281
            |||....|||::||||||.|||..||.::|.|..|.: |.||......::..::||:.|..|::|
plant   354 RVVQCAEGERSYHIFYQLCAGASPALREKLNLTSAHE-YKYLGQSNCYSINGVDDAERFHTVKEA 417

  Fly   282 LTVIDFTKEEQREIFGIVASILHLGNVGFTEVEGNAKVN-----------------SRDLVV--- 326
            |.::..:||:|..:|.::|::|.||||.||.::....|.                 .::.::   
plant   418 LDIVHVSKEDQESVFAMLAAVLWLGNVSFTVIDNENHVEPVADESFLFHSLGSWCWKQECLLHNM 482

  Fly   327 ---TAARLLGVNASELEAALTHRTIDARGDVVTSPLNQELAIYARDALAKAVYDRLFSWLVQRLN 388
               |.|:|:|.|.:||...|:.|.:..|.|.:...|....||.|||||||::|..||.|||:::|
plant   483 CLSTVAKLIGCNINELTLTLSKRNMRVRNDTIVQKLTLPQAIDARDALAKSIYSCLFDWLVEQIN 547

  Fly   389 ISLQAKETRASRNNVMGILDIYGFEIFQKNSFEQFCINFCNEKLQQLFIELTLKSEQDEYRREGI 453
            .||...:.|..|:  :.||||||||.|.||||||||||:.||:|||.|.....|.||:||.::||
plant   548 KSLAVGKRRTGRS--ISILDIYGFESFDKNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGI 610

  Fly   454 EWIPVEYFDNKVICNLIEEKHKGIISILDEECLRPGEPTDKTFLEKLTQKLAQHHHYVCHEKAPA 518
            :|..|::.||:...:|.|:|..|::|:||||...| ..||.|...||.|.|..:.   |......
plant   611 DWTRVDFEDNQNCLSLFEKKPLGLLSLLDEESTFP-NGTDLTLANKLKQHLQSNS---CFRGDKG 671

  Fly   519 HIKKIMLRDEFRLVHYAGEVTYSVNGFLDKNNDLLFRDLKETLSKAGNGIVRNCFPEKELRSLKR 583
            .:        |.:|||||||||...|||:||.|||..|..:.||.. :.::...|....|...::
plant   672 KL--------FTVVHYAGEVTYETTGFLEKNRDLLHSDSIQLLSSC-SCLLPQAFASSMLIQSEK 727

  Fly   584 PE---------------TAITQFRASLNNLMDILMCKEPSYIRCIKPNDLQTANVFNDELVLHQV 633
            |.               :..|:|::.|..||..|....|.:|||||||::|:..|:...|||.|:
plant   728 PVVGPLYKAGGADSQRLSVATKFKSQLFQLMQRLGNTTPHFIRCIKPNNIQSPGVYEQGLVLQQL 792

  Fly   634 KYLGLMENLRVRRAGFAYRRTYEL-FLERYKSLSKSTWPNYKGPGGPKAGVQQLVKDLGWDEEKY 697
            :..|::|.|    ....|:|.:.: .|.::..|                            .|.|
plant   793 RCCGVLEVL----CKGPYKRFFIIAILHQFNIL----------------------------PEMY 825

  Fly   698 RVGETKLFIRWPRTLFDTEDAYQEKKHEIAAIIQAHWKGLMQRRKYLKLRAQVIIMQSYCR-RKL 761
            :||.||||.|..: :...||......|.|.. :|:.::|...|....:|:..:.|:||:.| .|:
plant   826 QVGYTKLFFRTGQ-IGVLEDTRNRTLHGILR-VQSSFRGYQARCLLKELKRGISILQSFVRGEKI 888

  Fly   762 AQQAA--KKRREAADKIRAFIKGFITR------NDAPNGFNEEFIANAKRMWLLR---------- 808
            .::.|  ::|.:||..|::.:|..|.|      .||     ...|.:|.|.||:|          
plant   889 RKEFAELRRRHKAAATIQSQVKSKIARIQYKGIADA-----SVVIQSAIRGWLVRRCSGDIGWLK 948

  Fly   809 -----------------LAKELPTKVLDKSWPHAPGHCEEASGILHRLHRLHLARIYRLKLTPQQ 856
                             :..||..:||...  .|....||.:.||.:          ||:....:
plant   949 SGGAKTNELGEVLVKASVLSELQRRVLKAE--AALREKEEENDILQQ----------RLQQYENR 1001

  Fly   857 KRQFELKVLA-EKVFKGKKNNYASSVSTWFQEDRIPKEHIQRVNDFVASTFGSEQLKYQSFCTKF 920
            ..::|.|:.: |::::.:..:..||:|  ..:..:..|...|.:|  ||...|:...:.|...:|
plant  1002 WSEYETKMKSMEEIWQKQMRSLQSSLS--IAKKSLAVEDSARNSD--ASVNASDATDWDSSSNQF 1062

  Fly   921  920
            plant  1063  1062

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myo61FNP_476934.2 MYSc_Myo1 52..707 CDD:276829 264/709 (37%)
Myosin_TH1 863..1049 CDD:461801 13/59 (22%)
ATM1NP_001154628.2 MYSc_Myo8 179..835 CDD:276834 264/709 (37%)
MAD 967..>1047 CDD:461677 21/95 (22%)

Return to query results.
Submit another query.