DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Myo61F and XIF

DIOPT Version :9

Sequence 1:NP_476934.2 Gene:Myo61F / 38153 FlyBaseID:FBgn0010246 Length:1052 Species:Drosophila melanogaster
Sequence 2:NP_001323600.1 Gene:XIF / 817748 AraportID:AT2G31900 Length:1557 Species:Arabidopsis thaliana


Alignment Length:1049 Identity:345/1049 - (32%)
Similarity:526/1049 - (50%) Gaps:152/1049 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 ERDRAGVQDFVLLENYQSEEAFIGNLKKRFQEDLIYTYIGQVLISVNPYKQLP-IYTDDHVKAYR 96
            |...|||.|...|. |..|...:.||..||..:.||||.|.:||:|||:::|| :|:...::.|:
plant    58 EAPPAGVDDMTKLA-YLHEPGVLHNLDCRFALNEIYTYTGNILIAVNPFQRLPHLYSVHMMEQYK 121

  Fly    97 NKHFYEMPPHIFAVTDNAFRSLIEENRGQCVLISGESGSGKTEASKKVLQFIAACSGNQTTVEG- 160
            ...|.|:.||:|||.|.::|::|.|.|.|.:|:|||||:||||.:|.:::::|...|...| || 
plant   122 GAAFGELSPHLFAVADTSYRAMINEARSQSILVSGESGAGKTETTKMLMRYLAFMGGRSDT-EGR 185

  Fly   161 -VKDKLLKSNPVLEAFGNAKTNRNDNSSRFGKYMDIQFDFKGAPIGGNILNYLLEKSRVVAQMGG 224
             |:.::|:|||||||||||||.:|:|||||||:::||||.:|...|..|..||||:|||......
plant   186 SVEQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKRGKISGAAIRTYLLERSRVCQVSDP 250

  Fly   225 ERNFHIFYQLLAGADEALLQELRLERALD--TYSYLTDGLNGTVTRINDADSFKQVQQALTVIDF 287
            |||:|.||.|.|...|    |.:..:..|  |:.||.......|:.::||..:.:.:.|:.::..
plant   251 ERNYHCFYMLCAAPPE----EAKKFKVGDPRTFHYLNQTNCYEVSNVDDAREYLETRNAMDIVGI 311

  Fly   288 TKEEQREIFGIVASILHLGNVGFTEVE--GNAKV---NSRDLVVTAARLLGVNASELEAALTHRT 347
            .:|.|..||.:||:|||||||.|.:.|  .::|:   .||..:.|||.||..|...:|.:|..|.
plant   312 GQEAQDAIFRVVAAILHLGNVNFIKGEEADSSKLRDDKSRYHLQTAAELLMCNEKMMEDSLCKRV 376

  Fly   348 IDARGDVVTSPLNQELAIYARDALAKAVYDRLFSWLVQRLNISL-QAKETRASRNNVMGILDIYG 411
            |......:|.||:.|.|...||||||.||.|||.|:|.::|.|: |..:.:    :::|:|||||
plant   377 IVTPDGNITKPLDPESAASNRDALAKTVYSRLFDWIVDKINSSIGQDPDAK----SLIGVLDIYG 437

  Fly   412 FEIFQKNSFEQFCINFCNEKLQQLFIELTLKSEQDEYRREGIEWIPVEYFDNKVICNLIEEKHKG 476
            ||.|:.|||||.|||..||||||.|.:...|.||:||.||.|.|..||:.||:.:.:|||:|..|
plant   438 FESFKINSFEQLCINLTNEKLQQHFNQHVFKMEQEEYTREEINWSYVEFVDNQDVLDLIEKKPGG 502

  Fly   477 IISILDEECLRPGEPTDKTFLEKLTQKLAQHHHYVCHEKAPAHIKKIMLRDEFRLVHYAGEVTYS 541
            ||::|||.|:.| :.|.:||.:|:.|....|..:         .|..:.:..|.:.||||:||||
plant   503 IIALLDEACMFP-KSTHETFAQKMYQTYKGHKRF---------SKPKLAQTAFTVNHYAGDVTYS 557

  Fly   542 VNGFLDKNNDLLFRDLKETLSKAGNGIVRNCFPEKELRSLKRPETAI---------TQFRASLNN 597
            ...|||||.|.:..:.:..|..:....|.|.||       ..||.|.         |:|:..|..
plant   558 AEQFLDKNKDYVVAEHQALLDASKCSFVANLFP-------PLPEDASKQSKFSSIGTRFKQQLQA 615

  Fly   598 LMDILMCKEPSYIRCIKPNDLQTANVFNDELVLHQVKYLGLMENLRVRRAGFAYRRTYELFLERY 662
            ||:.|...||.||||:|||.:....:|.::.||:|::..|::|.:|:..||:..:|.::.||:|:
plant   616 LMETLNTTEPHYIRCVKPNAVLKPGIFENDNVLNQLRCGGVLEAIRISCAGYPTKRAFDEFLDRF 680

  Fly   663 KSLSKSTWPNYKGPGG--PKAGVQQLVKDLGWDEEKYRVGETKLFIRWPRTLFDTEDAYQEKKHE 725
            ..|:...      |.|  .|:....:...:|.  :.|::|:||:|:|..:..     ....::.|
plant   681 VMLATDV------PEGSDEKSACASICNKMGL--KGYQIGKTKIFLRAGQMA-----ELDARRTE 732

  Fly   726 IAA----IIQAHWKGLMQRRKYLKLRAQVIIMQSYCRRKLAQQAAKK-RREAAD-----KIRA-- 778
            :.|    :||...:..:.|:::|..:...|.||...|.|||::..:. |||||.     .|||  
plant   733 VLAGATKLIQRQIRTYLTRKEFLGQKRATIYMQKLWRAKLARKLYQNMRREAASICIQKNIRAHR 797

  Fly   779 ----FIKGFITRNDAPNGFNEEFIANAKRMWLLRLAKELPTK---VLDKSWPHAPGHCEEASGIL 836
                :.|...:......|.......|..|       ....||   ::.:.|.....|  ||    
plant   798 ARKNYTKLQASATVIQTGLRTMSARNKHR-------HRRRTKAAIIIQREWRRHQVH--EA---- 849

  Fly   837 HRLHR---LHLARIYRLKLTPQQKRQFELKVLAEKVFKGKKNNYASSVS--TWFQEDRIPKEHIQ 896
            ::.|:   |.|..::|.|:..::.:...:........|..|:.....|.  ||    |:..|..|
plant   850 YKKHKKATLALQCLWRAKVARKELKNLRMAARETGALKEAKDKLEKRVEELTW----RLELEKNQ 910

  Fly   897 RVNDFVASTFGSEQLKYQSFCTKFDRHGYKSRDRFILLSNK-----AIYVLDGKTYKQKHRLPLD 956
            :.:        .|..|.|...        |.::....|..|     |..:.|    |:..:|.::
plant   911 KAD--------LEDAKAQEIA--------KLQNNLTELQEKLDEAYAAIIRD----KEAAKLAIE 955

  Fly   957 K----------IDFT----LTNHNDDLMVIRIPLDLKKDKGDLILIIPRIIEFSTYIIDTVGTAS 1007
            :          :|.|    |.:.|::|.|     ::.|.||.:     :..|...:.::....||
plant   956 QAPPIIKEVPVVDNTQLELLNSQNNELEV-----EVAKLKGKI-----KEFEVKCFALENDSRAS 1010

  Fly  1008 IVSIVDRNS 1016
            :....|..|
plant  1011 VTEAEDAKS 1019

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myo61FNP_476934.2 MYSc 32..720 CDD:214580 277/708 (39%)
MYSc_Myo1 52..707 CDD:276829 268/676 (40%)
Myosin_TH1 863..1035 CDD:283635 32/175 (18%)
XIFNP_001323600.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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