DRSC/TRiP Functional Genomics Resources

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Protein Alignment Myo61F and myo1f

DIOPT Version :9

Sequence 1:NP_476934.2 Gene:Myo61F / 38153 FlyBaseID:FBgn0010246 Length:1052 Species:Drosophila melanogaster
Sequence 2:NP_001243600.1 Gene:myo1f / 565345 ZFINID:ZDB-GENE-081104-506 Length:1095 Species:Danio rerio


Alignment Length:1046 Identity:383/1046 - (36%)
Similarity:551/1046 - (52%) Gaps:180/1046 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 RAGVQDFVLLENYQSEEAFIGNLKKRFQEDLIYTYIGQVLISVNPYKQLPIYTDDHVKAYRNKHF 100
            ::||.|.|||... :|:|.:.||||||.:|.|:||||.|||||||:||:|.:||..::.|:....
Zfish    14 QSGVDDMVLLSKI-TEDAIVENLKKRFLDDYIFTYIGPVLISVNPFKQMPYFTDREIELYQGAAQ 77

  Fly   101 YEMPPHIFAVTDNAFRSLIEENRGQCVLISGESGSGKTEASKKVLQFIAACSGNQTTVEGVKDKL 165
            ||.||||:|:|||.:|:::.::..|||:||||||:|||.|:|.::.:|:..||..:.|:.|||.:
Zfish    78 YENPPHIYALTDNMYRNMMIDSENQCVIISGESGAGKTVAAKYIMGYISKVSGGGSKVQHVKDII 142

  Fly   166 LKSNPVLEAFGNAKTNRNDNSSRFGKYMDIQFDFKGAPIGGNILNYLLEKSRVVAQMGGERNFHI 230
            |:|||:|||||||||.||:||||||||.:|||...|.|.||.|.|:||||||||:|...||||||
Zfish   143 LQSNPLLEAFGNAKTVRNNNSSRFGKYFEIQFSRGGEPDGGKISNFLLEKSRVVSQNENERNFHI 207

  Fly   231 FYQLLAGADEALLQELRLERALDTYSYLTDGLNGTVTRINDADSFKQVQQALTVIDFTKEEQREI 295
            ||||:.|......:.|.: ...|.|.||.......|...||:..|::..:|:.||...:..|...
Zfish   208 FYQLIDGCTPQQKEGLGI-MTPDYYYYLNQSGTYKVDGTNDSKDFQETMEAMQVIGIPEMHQTLA 271

  Fly   296 FGIVASILHLGNVGFTEVEGNAKVNSRDLVVTAARLLGVNASELEAALTHRTIDA----RGDVVT 356
            ..|||.|||||::.|.||....:|.|.||:...|.|||::.:.|:..||.|.:|:    :.:.:.
Zfish   272 LQIVAGILHLGSINFIEVGNYGQVESTDLLAFPAYLLGIDQNRLQEKLTSRIMDSKWAGKTESIN 336

  Fly   357 SPLNQELAIYARDALAKAVYDRLFSWLVQRLNISLQAKETRASRNNVMGILDIYGFEIFQKNSFE 421
            ..||.|.|.:.|||||||:|.|||.:||:.:|.::|......|    :|:||||||||||:|.||
Zfish   337 VTLNLEQARHTRDALAKALYTRLFDYLVEEINKAMQKPIEELS----VGVLDIYGFEIFQRNGFE 397

  Fly   422 QFCINFCNEKLQQLFIELTLKSEQDEYRREGIEWIPVEYFDNKVICNLIEEK--HKGIISILDEE 484
            ||||||.||||||:|||||||:||:||.:|||:|.|:|||:||::|:|||.|  ..||:|:||:.
Zfish   398 QFCINFVNEKLQQIFIELTLKAEQEEYVQEGIKWTPIEYFNNKIVCDLIENKLSPPGIMSVLDDV 462

  Fly   485 CL---RPGEPTDKTFLEKLTQKLAQHHHYVCHEKAPAHIKKIMLRDEFRLVHYAGEVTYSVNGFL 546
            |.   ...:..|.|.|:||...:..|.|:......            |.:.||||:|:|.:|||.
Zfish   463 CATMHATKDGADMTLLQKLQNAVGTHDHFNSWNSG------------FIIHHYAGKVSYDINGFC 515

  Fly   547 DKNNDLLFRDLKETLSKAGNGIVRNCFPEKELRSLK-RPETAITQFRASLNNLMDILMCKEPSYI 610
            ::|.|:||.||.|.:..:....:::.|||......| ||.||.::.:...|.|:..||...|.||
Zfish   516 ERNRDVLFPDLIELMQSSQYDFIQSLFPENLNTDKKGRPTTAGSKIKRQANELVSTLMKCTPHYI 580

  Fly   611 RCIKPNDLQTANVFNDELVLHQVKYLGLMENLRVRRAGFAYRRTYELFLERYKSLSKSTWPNYKG 675
            ||||||:.:....:.:....|||:||||.||:|||||||||||.:..||.||..|:..|||.:: 
Zfish   581 RCIKPNETKRPKDWEESRARHQVEYLGLRENIRVRRAGFAYRRIFPKFLHRYAILTAETWPCWR- 644

  Fly   676 PGGPKAGVQQLVKDLGWDEEKYRVGETKLFIRWPRTLFDTEDAYQEKKHEIAAIIQAHWKGLMQR 740
             |..:.||..|::.:..:.::|::|.:|:||:.|.:||..|:..:.|....|..||..|:..:.|
Zfish   645 -GAEQQGVLHLLRTVNMETDQYQMGRSKIFIKNPESLFLLEEMRERKFDTFARTIQKAWRKYIAR 708

  Fly   741 RKYLKLRAQVIIMQSYCRRKLAQQAAKKRREAADKIRAFIKGFITRNDAPNGFNEEFIANAKRMW 805
            |||.::|                                                          
Zfish   709 RKYEQMR---------------------------------------------------------- 715

  Fly   806 LLRLAKELPTKVLDKSWPHAPGHCEEASGILHRLHRLHLARIYRLKLTPQQKRQFELKVLAEKVF 870
                                    ||||.||:                                 
Zfish   716 ------------------------EEASDILY--------------------------------- 723

  Fly   871 KGKKNNYASSVSTWFQEDRIPKEHIQRVNDFVASTFGSEQLKYQSFCTKFDRHGYKSRDRFILLS 935
             ..|....:|::..|..|.:..|....:..|:|.   .|::.:.....||||. :||..|.::||
Zfish   724 -NSKERRRNSINRNFVGDYLGMEDRPELRQFMAK---RERVDFADSVNKFDRR-FKSIKRDLILS 783

  Fly   936 NKAIYVLDGKTYKQ-----------KHRLPLDKI-DFTLTNHNDDLMVIRIPLDLKKDKGDLILI 988
            .|:||::..:..|:           |.||.:..| ..:|:...||..:      |.:.:.|.:|.
Zfish   784 PKSIYLIGREKIKKGPEKGQIKEVLKRRLDISGIRSVSLSTRQDDFFI------LHETEYDSLLE 842

  Fly   989 IPRIIEFSTYII----DTVGTASIVSIVDRNSLEHNVVK-GKGG----VIDIQTG-AEPGVVRDK 1043
            .....||.|.:.    :...:...:|..||  |:.||.| |.||    ::..|.| |:..|::..
Zfish   843 SMFKTEFLTLLCKRYEEQTRSKLTLSFSDR--LQFNVKKEGWGGGSTRMVVFQRGQADEAVIKAG 905

  Fly  1044 GHLVII 1049
            |..:.:
Zfish   906 GKTLTV 911

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myo61FNP_476934.2 MYSc 32..720 CDD:214580 318/693 (46%)
MYSc_Myo1 52..707 CDD:276829 306/664 (46%)
Myosin_TH1 863..1035 CDD:283635 46/193 (24%)
myo1fNP_001243600.1 MYSc 10..688 CDD:214580 318/693 (46%)
MYSc_Myo1 29..675 CDD:276829 306/664 (46%)
Myosin_TH1 715..897 CDD:283635 53/309 (17%)
SH3_MyoIe_If_like 1042..1094 CDD:212761
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D122881at2759
OrthoFinder 1 1.000 - - FOG0000187
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100187
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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