DRSC/TRiP Functional Genomics Resources

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Protein Alignment Myo61F and Myo28B1

DIOPT Version :9

Sequence 1:NP_476934.2 Gene:Myo61F / 38153 FlyBaseID:FBgn0010246 Length:1052 Species:Drosophila melanogaster
Sequence 2:NP_723294.1 Gene:Myo28B1 / 53515 FlyBaseID:FBgn0040299 Length:2122 Species:Drosophila melanogaster


Alignment Length:903 Identity:342/903 - (37%)
Similarity:498/903 - (55%) Gaps:111/903 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 DFNSQLKMETG-----LHERDRAGVQDFVLLENYQSEEAFIGNLKKRFQEDLIYTYIGQVLISVN 79
            |.|.|..:..|     :|...:..|:|.:.|.:.| |...:.||:.|:.:.|||||.|.:|:::|
  Fly    45 DRNKQFWVPAGDVLKAMHITSQEDVEDMITLGDLQ-EYTILRNLQNRYAKQLIYTYTGSMLVAIN 108

  Fly    80 PYKQLPIYTDDHVKAYRNKHFYEMPPHIFAVTDNAFRSLIEENRGQCVLISGESGSGKTEASKKV 144
            ||:.|||||:..::.||||...|:||||||::||||:.|......|||:||||||:||||::|.:
  Fly   109 PYQILPIYTNREIQLYRNKSLAELPPHIFAISDNAFQRLQRLKENQCVVISGESGAGKTESTKLI 173

  Fly   145 LQFIAACSGNQTTVEGVKDKLLKSNPVLEAFGNAKTNRNDNSSRFGKYMDIQFDFKGAPIGGNIL 209
            ||::||.||..:.:|   .:::::||::||||||||.|||||||||||::|:|..:||..|..|.
  Fly   174 LQYLAAISGKHSWIE---QQIIEANPIMEAFGNAKTVRNDNSSRFGKYIEIRFTPQGAIQGARIQ 235

  Fly   210 NYLLEKSRVVAQMGGERNFHIFYQLLAGADEALLQELRL-ERALDTYSYLTDGLNGTVTRINDAD 273
            .|||||||:|.|...|||:||||.:|||...|..:.|:| |::...|.||..|...|:....||.
  Fly   236 QYLLEKSRIVFQSRDERNYHIFYCMLAGLSTAERERLKLQEQSPSQYHYLAQGGCFTLPGRGDAK 300

  Fly   274 SFKQVQQALTVIDFTKEEQREIFGIVASILHLGNVGFTEVE----GNAKVNSRDLVVTAARLLGV 334
            .|..::.|:.|:.|..||...|..::|:||||||:.||..|    ..|:::....:...|:|||:
  Fly   301 DFADIRAAMKVLSFKPEEVWSILSLLAAILHLGNLRFTATEVANLATAEIDDTPNLQRVAQLLGI 365

  Fly   335 NASELEAALTHRTIDARGDVVTSPLNQELAIYARDALAKAVYDRLFSWLVQRLNISLQAKETRAS 399
            ..|.|.||||.|||...|:.||:.|::|.||..|||..|::||.:|..:|:|:|.::. |:....
  Fly   366 PISALNAALTQRTIFVHGEHVTTSLSKEAAIEGRDAFVKSLYDGIFVRIVRRINETIN-KQVDQP 429

  Fly   400 RNNVMGILDIYGFEIFQKNSFEQFCINFCNEKLQQLFIELTLKSEQDEYRREGIEWIPVEYFDNK 464
            .|:: |:|||:|||.|..|||||.|||:.||.|||.|:....|.|||||:.|.|.|..:|:.||:
  Fly   430 MNSI-GVLDIFGFENFDNNSFEQLCINYANENLQQFFVGHIFKMEQDEYQNEHINWQHIEFQDNQ 493

  Fly   465 VICNLIEEKHKGIISILDEECLRPGEPTDKTFLEKLTQKLAQHHHYVCHEKAPAHIK-KIMLRDE 528
            .|.:||..|...::|::|||...| :.||:|.||||         :|.|.....::| |......
  Fly   494 QILDLIGMKPMNLMSLIDEESKFP-KGTDQTLLEKL---------HVQHGNRSIYVKGKTTQTSL 548

  Fly   529 FRLVHYAGEVTYSVNGFLDKNNDLLFRDLKETLSKAGNGIVRNCFP-EKELRSLKRPETAITQFR 592
            |.:.||||.|.|:..|||:||.|....||:..:.::.|..:.:.|| |..:.:.|:..|...:||
  Fly   549 FGIRHYAGVVMYNPLGFLEKNRDSFSGDLRTLVQRSTNKYLVDIFPHEMPMDTAKKQPTLCVKFR 613

  Fly   593 ASLNNLMDILMCKEPSYIRCIKPNDLQTANVFNDELVLHQVKYLGLMENLRVRRAGFAYRRTYEL 657
            .||:.||..|....|.:|||||||:.:....|:.||.:.|::|.|:||..|:||||:..|..|..
  Fly   614 NSLDMLMRTLSQAHPYFIRCIKPNEYKEPKNFDKELCVRQLRYSGMMETARIRRAGYPIRHAYRA 678

  Fly   658 FLERYKSLSKSTWPNYKGPGGP--KAGVQQLVKD-----LGWDEEKYRVGETKLFIRWPRTLFDT 715
            |:|||:.|..        |.||  :...::|.:.     |..|.:: :.|:||||:|      |.
  Fly   679 FVERYRLLVP--------PVGPLEQCDCRKLARQICEVALPADSDR-QYGKTKLFLR------DE 728

  Fly   716 EDA----------------------------YQEKKHEIAAIIQAHWKGLMQRRKYLKLRAQVII 752
            :||                            |.::..|....:|.:|:|.:|||||..:|     
  Fly   729 DDASLELQRSQLMLKSIVTIQRGIRRVLFRRYMKRYREAIITVQRYWRGRLQRRKYQVMR----- 788

  Fly   753 MQSYCRRK---LAQQAAKK---RREAADKIRAFIKGFITRNDAPNGFNEEFIAN-AKRMWLLRLA 810
             |.:.|..   .|||...|   .|....|::|..:|::.|.|......|....| .|:..||:||
  Fly   789 -QGFHRLGACIAAQQLTTKFTMVRCRTIKLQALSRGYLVRKDFQKKLLERRKQNQLKKEELLKLA 852

  Fly   811 KELPTKVLDKSWPHAPGHCEEASGILHRLHRLHLARIYRLKLTPQQKR-QFELKVLAE 867
            |                 .:||..:| ||.:|...: .|.:...|:|| |.|.::.||
  Fly   853 K-----------------MKEAEELL-RLQQLKEQK-EREQREQQEKRLQEEQRLKAE 891

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myo61FNP_476934.2 MYSc 32..720 CDD:214580 293/729 (40%)
MYSc_Myo1 52..707 CDD:276829 283/668 (42%)
Myosin_TH1 863..1035 CDD:283635 2/5 (40%)
Myo28B1NP_723294.1 MYSc 62..737 CDD:214580 293/705 (42%)
MYSc_Myo7 81..726 CDD:276832 283/668 (42%)
IQ 765..785 CDD:197470 8/19 (42%)
DUF4355 827..>887 CDD:290964 22/78 (28%)
MyTH4 1031..1239 CDD:295320
B41 1248..1429 CDD:214604
FERM_N 1248..>1288 CDD:286467
FERM_B-lobe 1342..1429 CDD:271216
PH-like 1454..1547 CDD:302622
MyTH4 1674..1819 CDD:214535
B41 1827..2032 CDD:214604
FERM_N 1829..>1877 CDD:286467
FERM_M 1936..2032 CDD:278785
FERM_C2_MyoVII 2028..2121 CDD:270020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466268
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR13140
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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