DRSC/TRiP Functional Genomics Resources

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Protein Alignment Myo61F and Myo3a

DIOPT Version :10

Sequence 1:NP_476934.2 Gene:Myo61F / 38153 FlyBaseID:FBgn0010246 Length:1052 Species:Drosophila melanogaster
Sequence 2:NP_001406660.1 Gene:Myo3a / 498806 RGDID:1560083 Length:1614 Species:Rattus norvegicus


Alignment Length:1006 Identity:305/1006 - (30%)
Similarity:494/1006 - (49%) Gaps:196/1006 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 DYIDFNSQL-KMETGLHER--------DRA------GVQDF----VLLENYQSEEAFIGNLKKRF 62
            ::||.:..| ..|...|||        :|:      .|.|.    ||.||..||     :|:|.:
  Rat   303 EFIDIHQCLGSTEKARHERIHTKKGNLNRSLISSLKDVDDLATLDVLDENTVSE-----HLEKCY 362

  Fly    63 QEDLIYTYIGQVLISVNPYKQLPIYTDDHVKAYRNKHFYEMPPHIFAVTDNAFRSLIEENRGQCV 127
            ..|.||.|:|.:||::||::.|.:|:....|.|........|||||||.|..::|::..|..||:
  Rat   363 SRDQIYIYVGDILIALNPFQSLGLYSTKLSKLYIGAKRTANPPHIFAVADLGYQSMVTYNADQCI 427

  Fly   128 LISGESGSGKTEASKKVLQFIAAC--SGNQTTVEGVKDKLLKSNPVLEAFGNAKTNRNDNSSRFG 190
            :||||||:||||::..::|.:...  :.|:|    :::|:|:.|.::||||||.|..||||||||
  Rat   428 VISGESGAGKTESAHLLVQHLTVLGKANNRT----LQEKILQMNNLVEAFGNACTIINDNSSRFG 488

  Fly   191 KYMDIQFDFKGAPIGGNILNYLLEKSRVVAQMGGERNFHIFYQLLAGADE----AL--LQELRLE 249
            ||::::|...||.:|..|..||||||||:.|..||:||||||.:.||..|    ||  |.|.:..
  Rat   489 KYLEMKFTSSGAVVGAQISEYLLEKSRVIHQAIGEKNFHIFYYIYAGLAEKKKLALYKLPENKPP 553

  Fly   250 RAL--DTYSYLTDGLNGTVTRINDADSFKQVQQALTVIDFTKEEQREIFGIVASILHLGNVGFTE 312
            |.|  |....:.|.:|.:..:    ..::.::|...||.||.|:...::.::|:||::||:.|:.
  Rat   554 RYLQNDNLRTVQDMMNNSFYK----SQYELIEQCFKVIGFTMEQLGSVYSVLAAILNVGNIEFSS 614

  Fly   313 VEGNAKVN-----SRDLVVTAARLLGVNASELEAALTHRTIDARGDVVTSPLNQELAIYARDALA 372
            |....:::     :...:..:|.||.:.|.||:.|||...:..||:.:..|...|.|...|||.|
  Rat   615 VATEYQMDKSYICNHTALENSASLLCIQADELQEALTSHCVVTRGETIIRPNTVEKATDVRDATA 679

  Fly   373 KAVYDRLFSWLVQRLNISLQAKETRASRNNVM--GILDIYGFEIFQKNSFEQFCINFCNEKLQQL 435
            |.:|.|||||:|..:| ||...:|..|.|..:  |||||:|||.|:||||||.|||..||::|..
  Rat   680 KTLYGRLFSWIVNCIN-SLLKHDTSPSGNEELNIGILDIFGFENFKKNSFEQLCINIANEQIQYY 743

  Fly   436 FIELTLKSEQDEYRREGIEWIPVEYFDNKVICNLIEEKHKGIISILDEECLRPGEPTDKTFLEKL 500
            |.:.....||:||..|.::...:||.||:.:.::..:|..|::.:||||...| :.||:|.:||.
  Rat   744 FNQHVFAWEQNEYLNEDVDARVIEYEDNRPLLDMFLQKPMGLLFLLDEESRFP-KATDQTLVEKF 807

  Fly   501 TQKLAQHHHYVCHEKAPAHIKKIMLRDEFRLVHYAGEVTYSVNGFLDKNNDLLFRDLKETLSKAG 565
            ...|...:.:        ..|::.|  .|.:.||||:|.||.:|||.||.|.|..|:...|..:.
  Rat   808 EDNLKSQYFW--------RPKRMEL--SFGIHHYAGKVLYSASGFLAKNRDTLPTDIVLLLRSSE 862

  Fly   566 NGIVRNC--------------------------------FPEKELRSLKR---------PETAIT 589
            |.::|..                                ..:.|.|.:.|         .:|..:
  Rat   863 NSVIRQLVNHPLTKTGNLPLSKTKNIVNYQMQNSEKSTNLNKSETRDVTRHAYETTNVKTQTVSS 927

  Fly   590 QFRASLNNLMDILMCKEPSYIRCIKPNDLQTANVFNDELVLHQVKYLGLMENLRVRRAGFAYRRT 654
            .||.||.:|:..::..:|.::||||||:.:.|..::.|.||.|::..|::|..|:||.|:::|..
  Rat   928 YFRYSLMDLLSKMVVGQPHFVRCIKPNNDRQARKYDKEKVLIQLRCTGILETARIRRLGYSHRIL 992

  Fly   655 YELFLERYKSLSKSTWPNYKGPGGP------------KAGVQQLVKDLGWDEEKYRVGETKLFIR 707
            :..|::||..|.      ||....|            |||:           :.:.:|:||:|::
  Rat   993 FANFIKRYYVLC------YKSSEEPPVSPDTCATILEKAGL-----------DNWALGKTKVFLK 1040

  Fly   708 WPRTLFDTEDAYQEKKHEI--AAIIQAHWKGLMQRRKYLKL----RAQVIIMQSYCRRKLAQQAA 766
            :    :..|.....:|..|  ..:|||..:..:..::|.:|    :...:|:||..||.|.::..
  Rat  1041 Y----YHVEQLNLMRKEAIDKLVLIQASVRAFLGAKRYQELQQKRKTSAVIIQSAARRHLLRKQG 1101

  Fly   767 KK----RREAADKIRA------FIKGFITRNDAPNGFNEEFIANAKRMWLLRLAKELPTKVLDKS 821
            ||    :..|...:||      :.|.|.|:.::   |.::...||           :||...:..
  Rat  1102 KKTSNVQSTAGMSVRAKDQEFDYKKNFETKRES---FVKKHTENA-----------VPTNESNIP 1152

  Fly   822 WPH----------APGHCEEASGILHRLHRLH-----LARIYR--------------LKLTPQQK 857
            .|:          ||...|..:..:...:|.:     ::.:|.              ::::|:||
  Rat  1153 TPNNKESPSAGKTAPFRAEAKATNVESNNRKYQTQKKMSNVYAEGQNQELYIVGDSWVEVSPRQK 1217

  Fly   858 RQFELKVLAEKVFKGKKNN-YASSVSTWFQE 887
            ...:|:. :.|:.|.:|.: ...|...|:.|
  Rat  1218 YVQDLEE-SRKLRKEEKGDAVIQSYCQWYTE 1247

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myo61FNP_476934.2 MYSc_Myo1 52..707 CDD:276829 246/724 (34%)
Myosin_TH1 863..1049 CDD:461801 6/26 (23%)
Myo3aNP_001406660.1 Protein Kinases, catalytic domain 2..287 CDD:473864
MYSc_Myo3 352..1040 CDD:276830 249/729 (34%)
MBD_Myo3a 1408..1455 CDD:439318
Blue background indicates that the domain is not in the aligned region.

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