DRSC/TRiP Functional Genomics Resources

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Protein Alignment Myo61F and myo1e.2

DIOPT Version :9

Sequence 1:NP_476934.2 Gene:Myo61F / 38153 FlyBaseID:FBgn0010246 Length:1052 Species:Drosophila melanogaster
Sequence 2:NP_001011082.1 Gene:myo1e.2 / 496494 XenbaseID:XB-GENE-5913944 Length:1093 Species:Xenopus tropicalis


Alignment Length:960 Identity:370/960 - (38%)
Similarity:530/960 - (55%) Gaps:164/960 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 RAGVQDFVLLENYQSEEAFIGNLKKRFQEDLIYTYIGQVLISVNPYKQLPIYTDDHVKAYRNKHF 100
            ::||.|.|||... :|||.:.|||||:.:|.|:||||.|||||||:||||.:||..::.|:....
 Frog    16 QSGVDDMVLLSKI-TEEAIMENLKKRYMDDYIFTYIGPVLISVNPFKQLPYFTDREIEMYQGAAQ 79

  Fly   101 YEMPPHIFAVTDNAFRSLIEENRGQCVLISGESGSGKTEASKKVLQFIAACSGNQTTVEGVKDKL 165
            ||.||||:|:.|..:|:::.:...|||:||||||:|||.|:|.::.:::..||....|:.|||.:
 Frog    80 YENPPHIYALADTMYRNMLIDGENQCVIISGESGAGKTVAAKYIMGYVSKVSGGGPKVQHVKDII 144

  Fly   166 LKSNPVLEAFGNAKTNRNDNSSRFGKYMDIQFDFKGAPIGGNILNYLLEKSRVVAQMGGERNFHI 230
            |||||:|||||||||.||:||||||||.:|||...|.|.||.|.|:||||||||:|..|||:|||
 Frog   145 LKSNPLLEAFGNAKTVRNNNSSRFGKYFEIQFSRGGEPDGGKISNFLLEKSRVVSQNSGERSFHI 209

  Fly   231 FYQLLAGADEALLQELRLERALDTYSYLTDGLNGTVTRINDADSFKQVQQALTVIDFTKEEQREI 295
            |||||.||.....:.|.: .:.|.|.||.......|..::|...|.:...|:.|:....:.|..:
 Frog   210 FYQLLEGASAEDKENLGV-TSPDYYFYLNQSAVYHVDDVSDKKEFAETMLAMDVVGLGPDTQTSV 273

  Fly   296 FGIVASILHLGNVGFTEVEGNAKVNSRDLVVTAARLLGVNASELEAALTHRTIDA----RGDVVT 356
            ..|||.|||||||.|||...:|.|.|:|.:...|.|||::.:.|:..||.|.:|:    :.:|:.
 Frog   274 LQIVAGILHLGNVAFTESGNHAVVESQDFLAFPAYLLGIDQARLQDKLTSRKMDSKWGGKSEVID 338

  Fly   357 SPLNQELAIYARDALAKAVYDRLFSWLVQRLNISLQAKETRASRNNVMGILDIYGFEIFQKNSFE 421
            ..||.|.|.:.|||||||:|.|||.:||:.:|.::: |:|....   :|:||||||||||||.||
 Frog   339 VTLNAEQACFTRDALAKALYTRLFDFLVEAINKAMR-KDTEEYN---IGVLDIYGFEIFQKNGFE 399

  Fly   422 QFCINFCNEKLQQLFIELTLKSEQDEYRREGIEWIPVEYFDNKVICNLIEEK--HKGIISILDEE 484
            ||||||.||||||:|||||||:||:||.:|||.|.|:|||:|||:|:|||.|  ..|::||||:.
 Frog   400 QFCINFVNEKLQQIFIELTLKAEQEEYVQEGIHWNPIEYFNNKVVCDLIESKVSPPGVMSILDDV 464

  Fly   485 CL---RPGEPTDKTFLEKLTQKLAQHHHYVCHEKAPAHIKKIMLRDEFRLVHYAGEVTYSVNGFL 546
            |.   ..||..|:|.|:||...:..|.|:....:.            |.:.||||:|:|.|:||.
 Frog   465 CATMHAKGEGADQTLLQKLQSAIGSHEHFNSWNRG------------FIIHHYAGKVSYDVSGFC 517

  Fly   547 DKNNDLLFRDLKETLSKAGNGIVRNCFPEKELRSLK--RPETAITQFRASLNNLMDILMCKEPSY 609
            ::|.|:||.||.|.:..:....:|..||| .|.:.|  ||.||.::.:...|:|:..||...|.|
 Frog   518 ERNRDVLFVDLIELMQSSEIPFIRERFPE-NLNAEKKGRPSTAGSKIKKQANDLVQTLMKCTPHY 581

  Fly   610 IRCIKPNDLQTANVFNDELVLHQVKYLGLMENLRVRRAGFAYRRTYELFLERYKSLSKSTWPNYK 674
            |||||||:.:....:.|..|.|||:||||.||:||||||:||||.::.||.||..|::.|||.::
 Frog   582 IRCIKPNETKKPRDWEDSRVKHQVEYLGLRENIRVRRAGYAYRRVFQKFLHRYAILTRETWPQWR 646

  Fly   675 GPGGPKAGVQQLVKDLGWDEEKYRVGETKLFIRWPRTLFDTEDAYQEKKHEIAAIIQAHWKGLMQ 739
              |..|.||..|::.:..|.::|::|.||:||:.|.:||..|:..:.|....|.:||..|:....
 Frog   647 --GDEKKGVMHLLRSVNMDSDQYQLGRTKVFIKAPESLFLLEEMRERKYDNYARVIQKAWRKHTA 709

  Fly   740 RRKYLKLRAQVIIMQSYCRRKLAQQAAKKRREAADKIRAFIKGFITRNDAPNGFNEEFIANAKRM 804
            .|||:::|                                                         
 Frog   710 VRKYIRMR--------------------------------------------------------- 717

  Fly   805 WLLRLAKELPTKVLDKSWPHAPGHCEEASGILHRLHRLHLARIYRLKLTPQQKRQFELKVLAEKV 869
                                     ||||.|:               |..:::|:          
 Frog   718 -------------------------EEASSIV---------------LNQKERRR---------- 732

  Fly   870 FKGKKNNYASSVSTWFQEDRIPKEHIQRVNDFVASTFGSEQLKYQSFCTKFDRHGYKSRDRFILL 934
                     :|::..|..|.|..:....:..||..   .|::.:....||:||. :|:..|.::|
 Frog   733 ---------NSINRNFVGDYIGMDGRPELRQFVGR---RERIDFADVVTKYDRR-FKTLKRDLVL 784

  Fly   935 SNKAIYVLDGKTYKQ-----------KHRLPLDKI-DFTLTNHNDDLMVI 972
            :.|.:|::..:..||           |.::.|:.| ..:|:...||.:::
 Frog   785 TPKFLYLIGREKVKQGPDKGQIKEVLKRKIELENIQSVSLSKLQDDFIIL 834

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myo61FNP_476934.2 MYSc 32..720 CDD:214580 330/694 (48%)
MYSc_Myo1 52..707 CDD:276829 318/665 (48%)
Myosin_TH1 863..1035 CDD:283635 24/122 (20%)
myo1e.2NP_001011082.1 MYSc_Myo1 31..677 CDD:276829 318/665 (48%)
Myosin_TH1 717..918 CDD:368706 32/238 (13%)
SH3_MyoIe_If_like 1040..1092 CDD:212761
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D122881at2759
OrthoFinder 1 1.000 - - FOG0000187
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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