DRSC/TRiP Functional Genomics Resources

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Protein Alignment Myo61F and jar

DIOPT Version :9

Sequence 1:NP_476934.2 Gene:Myo61F / 38153 FlyBaseID:FBgn0010246 Length:1052 Species:Drosophila melanogaster
Sequence 2:NP_001014650.2 Gene:jar / 42889 FlyBaseID:FBgn0011225 Length:1268 Species:Drosophila melanogaster


Alignment Length:890 Identity:288/890 - (32%)
Similarity:453/890 - (50%) Gaps:100/890 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 SEEAFIGNLKKRFQEDLIYTYIGQVLISVNPYKQL-PIYTDDHVKAYRNKHFYEMPPHIFAVTDN 113
            :|..|:.|||.|:.:|.||||:..:||:||||::: .:|..|.:|.|..:...|:|||:||:.|.
  Fly    69 NEATFLDNLKTRYYKDKIYTYVANILIAVNPYREIKELYAPDTIKKYNGRSLGELPPHVFAIADK 133

  Fly   114 AFRSLIEENRGQCVLISGESGSGKTEASKKVLQFIAACSGNQTTVEGVKDKLLKSNPVLEAFGNA 178
            |.|.:......|.:::|||||:||||::|.:|:::.....:...:|   .|:|.:||||||||||
  Fly   134 AIRDMRVYKLSQSIIVSGESGAGKTESTKYLLKYLCYSHDSAGPIE---TKILDANPVLEAFGNA 195

  Fly   179 KTNRNDNSSRFGKYMDIQFDFKGAPIGGNILNYLLEKSRVVAQMGGERNFHIFYQLLAGADEALL 243
            ||.||:|||||||::::.:|.|...:||.|.:|||||||:..|...|||:|:||.|||||.:.|.
  Fly   196 KTTRNNNSSRFGKFIEVHYDAKCQVVGGYISHYLLEKSRICTQSAEERNYHVFYMLLAGAPQQLR 260

  Fly   244 QELRLERALDTYSYL---TDGLNGTVTR----------------------INDADSFKQVQQALT 283
            .:|.|.:. |.|.||   |.......|.                      |:|...|..:.:||.
  Fly   261 DKLSLGKP-DDYRYLSGCTQYFANAKTEQLIPGSQKSKNHQQKGPLKDPIIDDYQHFHNLDKALG 324

  Fly   284 VIDFTKEEQREIFGIVASILHLGNVGFTE----VEGNAKV---NSRDLVVTAARLLGVNASELEA 341
            .:..:..|:..|:.:||::|||||:.|.|    |.|..:|   :.:.|.:|:. ||||:.:||..
  Fly   325 RLGLSDTEKLGIYSLVAAVLHLGNIAFEEIPDDVRGGCQVSEASEQSLTITSG-LLGVDQTELRT 388

  Fly   342 ALTHRTIDA-----RGDVVTSPLNQELAIYARDALAKAVYDRLFSWLVQRLNISLQAKETRASRN 401
            ||..|.:.:     :|.|:..||....|..||||||||:|.|||..:|..:|.|:..:    :.|
  Fly   389 ALVSRVMQSKGGGFKGTVIMVPLKIYEASNARDALAKAIYSRLFDRIVGLINQSIPFQ----ASN 449

  Fly   402 NVMGILDIYGFEIFQKNSFEQFCINFCNEKLQQLFIELTLKSEQDEYRREGIEWIPVEYFDNKVI 466
            ..:|:|||.|||.|..|||||||||:||||||:.|.:..||:||:.|:|||:....:.:.||:.|
  Fly   450 FYIGVLDIAGFEYFTVNSFEQFCINYCNEKLQKFFNDNILKNEQELYKREGLNVPEITFTDNQDI 514

  Fly   467 CNLIEEKHKGIISILDEECLRPGEPTDKTFLEKLTQKLAQHHHYVC--HEKAPAHIKKIMLRDE- 528
            ..|||.|..||.::||||...| :|:...|..::.:..|.|:....  ..:..||   ..|||| 
  Fly   515 IELIEAKSNGIFTLLDEESKLP-KPSYSHFTAEVHKSWANHYRLGLPRSSRLKAH---RTLRDEE 575

  Fly   529 -FRLVHYAGEVTYSVNGFLDKNNDLLFRDLKETLSKAGNGIVRNCFPEKELRSLKRPETAI---T 589
             |.:.|:||.|.|:...|::||||.|...|:..:.:..|.:::..||.....|::.....|   :
  Fly   576 GFLVRHFAGAVCYNTEQFIEKNNDALHASLEGLVQECDNPLLQTLFPSGSSTSVRGKLNFISVGS 640

  Fly   590 QFRASLNNLMDILMCKEPSYIRCIKPNDLQTANVFNDELVLHQVKYLGLMENLRVRRAGFAYRRT 654
            :|:..|..||:.|.....::|||||||.......|...|.|.|:|..|.:..|.:...|:..|  
  Fly   641 KFKTQLGELMEKLEQNGTNFIRCIKPNSKMIDRQFEGSLALAQLKCSGTISVLELMEHGYPSR-- 703

  Fly   655 YELFLERYKSLSKSTWPNYKGPGGPKAGVQQLVKDLGWDEEKYRVGETKLFIRWPRTLFDTEDAY 719
             .||.:.| |:.||..|........:...:.:.:.|....:.::.|.||:|.| |....:.:...
  Fly   704 -VLFADLY-SMYKSVLPPELVSLPARTFCEAMFQSLNLSAKDFKFGITKVFFR-PGKFVEFDRIM 765

  Fly   720 QEKKHEIAAI--------IQAHW-KGLMQRRKYLKLRAQVI-------IMQSYCRRKLAQQAAKK 768
            :.....:.||        |::.| |..:.....:|||.::|       |.|...|..||::..:.
  Fly   766 RSDPENMLAIVAKVKKWLIRSRWVKSALGALCVIKLRNRIIYRNKCVLIAQRIARGFLARKQHRP 830

  Fly   769 RREAADKIRAFIKGFITRNDAPNGF---NEEFIANAKRMW--------LLRLAKELPTKVLDKSW 822
            |.:...||.......:...:..:|.   .||.|:....::        .:::...:..:.:|..:
  Fly   831 RYQGIGKINKIRTNTLKTIEIASGLKMGREEIISGVNDIYRQIDDAIKKIKMNPRITQREMDSMY 895

  Fly   823 PHAPGHCEEASGILHRLHRLHLARIYRLKLTPQQKRQFELKVLAE 867
                      :.::..:::|.:....:||...|.:.|..|:.:.|
  Fly   896 ----------TVVMANMNKLTVDLNTKLKEQQQAEEQERLRKIQE 930

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myo61FNP_476934.2 MYSc 32..720 CDD:214580 259/714 (36%)
MYSc_Myo1 52..707 CDD:276829 256/699 (37%)
Myosin_TH1 863..1035 CDD:283635 1/5 (20%)
jarNP_001014650.2 Myosin_N 7..45 CDD:280832
Myosin_head 59..754 CDD:278492 257/701 (37%)
MYSc_Myo6 71..754 CDD:276833 256/699 (37%)
RILP-like <968..1015 CDD:304877
Myosin-VI_CBD 1160..1246 CDD:293129
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466298
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D122881at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR13140
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.950

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