DRSC/TRiP Functional Genomics Resources

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Protein Alignment Myo61F and Mhcl

DIOPT Version :9

Sequence 1:NP_476934.2 Gene:Myo61F / 38153 FlyBaseID:FBgn0010246 Length:1052 Species:Drosophila melanogaster
Sequence 2:NP_732109.2 Gene:Mhcl / 41955 FlyBaseID:FBgn0026059 Length:2194 Species:Drosophila melanogaster


Alignment Length:1115 Identity:251/1115 - (22%)
Similarity:449/1115 - (40%) Gaps:240/1115 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 FNSQLKMETGLHERDRAGVQDFVLLEN-----------------------------YQSEEAFIG 56
            |.:.:::.|....||........||.|                             |.:|.:.:.
  Fly   515 FTAAIRLPTASSGRDEENKLSLRLLHNGEQLTVDEDDVEKQNSPALDLVEDICELKYLNEASVLH 579

  Fly    57 NLKKRFQEDLIYTYIGQVLISVNPYKQLPIYTDDHVKAYRNKHFYEMPPHIFAVTDNAFRSLIEE 121
            .|::|:..:||:|..|..|:.|||...|.:|::..|..:|.....:||||::::...|:|||:|.
  Fly   580 CLRQRYASNLIHTKAGPTLLVVNPMAPLSLYSEKVVSMFRGCKTEDMPPHVYSLAQTAYRSLVET 644

  Fly   122 NRGQCVLISGESGSGKTEASKKVLQFIAACSGNQTTVEGVKDKLLKSNPVLEAFGNAKTNRNDNS 186
            .|.|.::..|.|||||:.:.|..|.::|..:|........ :|:.....:||||||.||..|.|:
  Fly   645 RRDQSLIFMGRSGSGKSTSFKHALNYLALAAGAYNNFINA-EKVNALCTILEAFGNTKTCLNSNA 708

  Fly   187 SRFGKYMDIQFDFKGAPIGGNILNYLLEKSRVVAQMGGERNFHIFYQLLAGADEALLQELRLERA 251
            :|..:.:.:.||..|.....::...|.|:.|...::|.|.:|||..:|||||...|.:||.||..
  Fly   709 TRMTQLLSLDFDQTGQIASASLQVLLPERQRAGRRLGHEHSFHIMTRLLAGAAGLLQKELHLENI 773

  Fly   252 LDTYSYLTDGLNGTV-TRINDADSFKQVQQALTVIDFTKEEQREIFGIVASILHLGNVGFTEVEG 315
            ....|:....|:..: .|...|:.|.:..||...::...:..|.|:.|:|:|.|||..|.|::..
  Fly   774 TSEDSHPFISLSQKLEDRHRAANDFMRTVQAFETLNIDAKAVRGIWSILAAIYHLGIAGVTKLGT 838

  Fly   316 NAKVNSRDLVVTAAR----LLGVNASELEAA---LTHRTIDARG----DVVTSPLNQELAIYARD 369
            .:...::....||||    |||||..:|.:|   ||.......|    ...||....|.|....:
  Fly   839 GSTARTQFANPTAARKASGLLGVNLEDLSSAAFGLTQPNAPNGGLSPSKSPTSDTGHEWAWECLE 903

  Fly   370 ALAKAVYDRLFSWLVQRLNISL-QAKETRASRNNVMGILDIYGFEIFQKN----------SFEQF 423
            ||...:|....:.:|..:|..: .:..|.||   :| ::|..||:    |          :....
  Fly   904 ALVIGLYSEALAAVVALINRQICTSSHTIAS---IM-LIDTPGFQ----NPASCGQQVGATLADL 960

  Fly   424 CINFCNEKLQQLFIELTLKSEQDEYRREGIEWIPVEYF----------------DNKVI----CN 468
            ..|:..|:||.||...||.:.:|.|.:|.:| |.::..                .|.|:    .:
  Fly   961 RHNYLQERLQMLFHHTTLVAPRDRYAQELVE-IEMDLASECHPGPLISLIDKAPQNHVVRSSQRD 1024

  Fly   469 LIEEKHKGIISILDEECLRPGEPTDKTFLEKLTQKLAQHHHYVCHEKAPAHIKKIMLRDEFRLVH 533
            |.|...:|::.:||||.:.|.. .|.||||:|........|:       :.::|.....:|.|.|
  Fly  1025 LREHDRRGMLWLLDEEAIYPNS-NDDTFLERLFSHYGDREHH-------SLLRKCAGPRQFVLHH 1081

  Fly   534 YAG--EVTYSVNGFLDKNND---------LLFRDLKETLSK-------AGNGIVRNC--FPEKE- 577
            ..|  .|.|:|:|::..:.:         ||....:|.:::       .|:|.:..|  |...| 
  Fly  1082 LQGTNPVLYAVDGWVRHSREHPGIRNAVSLLQDSSREEINRLYIGSLTRGSGAMVFCGSFAGLEG 1146

  Fly   578 ------LRSLKRPETA--------ITQFRASLNNLMDILMCKEPSYIRC--IKPN----DLQTAN 622
                  :.|::|..|.        :.|.:.:::.::|.|......::.|  ::.|    ...|||
  Fly  1147 TQSLRRVSSIRRSFTTAGVKRNSIMLQVKFTVDGIIDTLRRTGTHFVHCYLLQHNAGKHTKYTAN 1211

  Fly   623 ---------------VFNDELVLHQVKYLGLMENLRVRRAGFAYRRTYELFLERYKSLSKSTWPN 672
                           :.|..|:..|::...::|..|:.|.||........|:.|:..|:.....|
  Fly  1212 GSPSSAAGQVSSEEEMVNVPLLRSQLRGSQVLEAARLHRLGFPESVPLLEFVRRFGLLAGDLASN 1276

  Fly   673 YKGPGGPKAGVQQLVKDLGWDEEKYRVGETKLFIRWPRTLFDTEDAYQEKKHEIAAIIQAHWKGL 737
                  ....|:|::.....|...||:|.:::..|                   :.::..     
  Fly  1277 ------KDVSVEQILAVNELDVASYRIGPSQILFR-------------------SGVLSE----- 1311

  Fly   738 MQRRKYLKLRAQVIIMQSYCRRKLAQQAAKKRREAADKIRAF---IKGFITRNDAPNGFNEEFIA 799
            ::.::.:.|..::|.:|::||..||::...:||.....:|..   :|.|:...|.|         
  Fly  1312 LEAKRDVLLSDRIIQLQAFCRGYLARKKMSQRRVQELAVRCIQRNVKAFLAVRDWP--------- 1367

  Fly   800 NAKRMWLLRLAKELPTKVLDKSWPHAPGHCEEASGILHRLHRLHLARIYRLKLTPQQKRQFELKV 864
                 |...|.:..|...:.::........||...:..:|.::...|    .....:.::.|.| 
  Fly  1368 -----WWRLLVRVTPLLNVHRTEEQLKTANEELLMLRAKLEKIECDR----SEVKAENQKLEAK- 1422

  Fly   865 LAEKVFKGKKNNYASSVSTWFQEDRIPKEHIQRVNDFVASTFG------------SEQLKYQSFC 917
            |:|......:....:.::|    :|:..|..:|:.  :....|            :|:|:.:..|
  Fly  1423 LSELTVDLAEERSTAHIAT----ERLEAETAERLK--LEKELGDQTNKVKNLQETTEKLEMELIC 1481

  Fly   918 TKFDRHGY------KSRDRFILLSNKAIYVLDGKTYKQKHRLPLDKIDFTL----TNHNDD---L 969
            .|.|.:|.      ::.|.           :.|..||.|:.....:::||.    |.|..|   |
  Fly  1482 AKSDLNGISEDEDAENEDG-----------VGGGVYKLKYERVARELEFTKRRLHTQHEHDLEQL 1535

  Fly   970 MVIRIPLDLK 979
            :.::..|::|
  Fly  1536 VALKKHLEMK 1545

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myo61FNP_476934.2 MYSc 32..720 CDD:214580 200/815 (25%)
MYSc_Myo1 52..707 CDD:276829 192/753 (25%)
Myosin_TH1 863..1035 CDD:283635 27/142 (19%)
MhclNP_732109.2 PDZ_signaling 339..426 CDD:238492
MYSc 556..1317 CDD:214580 195/808 (24%)
MYSc_Myo18 575..1305 CDD:276837 192/753 (25%)
GBP_C <1540..1750 CDD:303769 2/6 (33%)
COG1340 1565..1833 CDD:224259
coiled coil 1723..1734 CDD:293879
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466249
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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