DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Myo61F and Prm

DIOPT Version :9

Sequence 1:NP_476934.2 Gene:Myo61F / 38153 FlyBaseID:FBgn0010246 Length:1052 Species:Drosophila melanogaster
Sequence 2:NP_523982.2 Gene:Prm / 39002 FlyBaseID:FBgn0003149 Length:879 Species:Drosophila melanogaster


Alignment Length:903 Identity:162/903 - (17%)
Similarity:311/903 - (34%) Gaps:289/903 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   255 YSY-LTDGLNGT----VTRINDADSFKQVQQALTVIDFTKEEQREI--------FGIVASILHLG 306
            ||| .|....||    :..|.|..|..:::..:.::....|.:||:        ..:...::.:.
  Fly    12 YSYRATSTGPGTADVNIEYIQDLSSLSRLEDKIRLLQDDLEVERELRQRIEREKADLSVQVIQMS 76

  Fly   307 NVGFTEVEGNAK-----VNSRDLVVTAARLLGVNASELEAALTHRTIDARGDVVTSPLNQELAIY 366
            . ...|.||.|:     ...||..:...|.| :....||:..|...:..:.:.:.:...:::.|.
  Fly    77 E-RLEEAEGGAEHQFEANRKRDAELLKLRKL-LEDVHLESEETTLLLKKKHNEIITDFQEQVEIL 139

  Fly   367 ARDALAKAVYDR---------LFSWL---------------------------VQRLN---ISLQ 392
            .::. |:|..|:         |.|.:                           ::.||   |.:.
  Fly   140 TKNK-ARAEKDKAKFQTEVYELLSQIESYNKEKIVSEKHISKLEVSISELNVKIEELNRTVIDIS 203

  Fly   393 AKETRASRNNVMGILDIYGFEI-FQKNSFEQFCINFCNEKLQQLFIELTLKSEQDEYRR-----E 451
            :..:|.|:.|:....|:...:: ....||.:      ::.:.||  |...:..:||.||     .
  Fly   204 SHRSRLSQENIELTKDVQDLKVQLDTVSFSK------SQVISQL--EDARRRLEDEDRRRSLLES 260

  Fly   452 GIEWIPVEYFDNKVICNLIEEKHKGIISILDEECLRPGEPTDKTFLEKLTQKLA---------QH 507
            .:..:.:| .|:  :.|.:||:.:..|.:  |..|........::..|...::|         :.
  Fly   261 SLHQVEIE-LDS--VRNQLEEESEARIDL--ERQLVKANADATSWQNKWNSEVAARAEEVEEIRR 320

  Fly   508 HHYVCHEKAPAHIKKIMLRD---EFRLVHYAGEVTYSVNGFLDKNNDLLFRDLKET------LSK 563
            .:.|...:...||:.::::.   |......|.||            ::|..||:::      |:|
  Fly   321 KYQVRITELEEHIESLIVKVNNLEKMKTRLASEV------------EVLIIDLEKSNNSCRELTK 373

  Fly   564 AGNGIVRNCFPEKELRSLKRPETAITQFRASLNNLMDILMCKEPSYIRCIKPNDLQTANVFNDEL 628
            :.|.:.::   ..||:|  |.:..|..:..|..:|.:    |....:|.:  ::|......|::|
  Fly   374 SVNTLEKH---NVELKS--RLDETIILYETSQRDLKN----KHADLVRTV--HELDKVKDNNNQL 427

  Fly   629 V---------LHQVKYLGLMENLRVRRAGFAYRRTYELFLE--RYKSLSKSTWPNYKGPGGPKAG 682
            .         ||:.|  |.:..|.        ||.:||.||  |.::........||.....:..
  Fly   428 TRENKKLGDDLHEAK--GAINELN--------RRLHELELELRRLENERDELTAAYKEAEAGRKA 482

  Fly   683 VQQLVKDLGWDEEKYRVGETKLFIRWPRTLFDTEDAYQEKKHEIAAI---------------IQA 732
            .:|..:.|..|..:||              .|.|....||..||.||               |:|
  Fly   483 EEQRGQRLAADFNQYR--------------HDAERRLAEKDEEIEAIRKQTSIEIEQLNARVIEA 533

  Fly   733 HW----------------------------KGLMQRRKYLK--------LRAQVIIMQSYCRRKL 761
            ..                            |..:..:|.:|        |:|....:|...:..|
  Fly   534 ETRLKTEVTRIKKKLQIQITELEMSLDVANKTNIDLQKVIKKQSLQLTELQAHYEDVQRQLQATL 598

  Fly   762 AQQAAKKRREAA-----DKIRAFIKGF--------ITRNDAPNGFNEEFIANAKRMWL-LRLAKE 812
            .|.|..:||.|.     :::|:.:...        :...:|.:..||...||...:.: .:|.:|
  Fly   599 DQYAVAQRRLAGLNGELEEVRSHLDSANRAKRTVELQYEEAASRINELTTANVSLVSIKSKLEQE 663

  Fly   813 LPTKVLDKSWPHAPGHCEEASGILHRLHRLHLARIYRLKLTPQQKRQFELKVLAEKVFKGKKNNY 877
            |.....|         .||.|..|            |:.....||.|.|||.:.|:|.:      
  Fly   664 LSVVASD---------YEEVSKEL------------RISDERYQKVQVELKHVVEQVHE------ 701

  Fly   878 ASSVSTWFQEDRIPK-EHIQRVNDFVASTFGSEQLKYQSFCTKFDR---HGYKSRDRFILLSNKA 938
                    :::||.| |.|::          |.:::.::...:.:.   :......|.|......
  Fly   702 --------EQERIVKLETIKK----------SLEVEVKNLSIRLEEVELNAVAGSKRIISKLEAR 748

  Fly   939 IYVLDGKTYKQKHRLPLDKIDFTLTNHNDDLMVIR--------IPLDLKKDKGDLILI 988
            |..|:.:..::|.|            |.:.:.::|        :.:..::|:.:|||:
  Fly   749 IRDLELELEEEKRR------------HAETIKILRKKERTVKEVLVQCEEDQKNLILL 794

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myo61FNP_476934.2 MYSc 32..720 CDD:214580 101/556 (18%)
MYSc_Myo1 52..707 CDD:276829 99/543 (18%)
Myosin_TH1 863..1035 CDD:283635 21/138 (15%)
PrmNP_523982.2 Myosin_tail_1 <34..853 CDD:279860 154/881 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466294
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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