DRSC/TRiP Functional Genomics Resources

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Protein Alignment Myo61F and Myo3b

DIOPT Version :10

Sequence 1:NP_476934.2 Gene:Myo61F / 38153 FlyBaseID:FBgn0010246 Length:1052 Species:Drosophila melanogaster
Sequence 2:NP_001380706.1 Gene:Myo3b / 366069 RGDID:1560313 Length:1333 Species:Rattus norvegicus


Alignment Length:922 Identity:293/922 - (31%)
Similarity:461/922 - (50%) Gaps:178/922 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 KMETGL-HERDRAG----VQDFVLLENYQSEEAFIGNLKKRFQEDLIYTYIGQVLISVNPYKQLP 85
            :|.||. |..:.||    ..|.|.|| ...|:..|..|:||:.:.|||||:|.:||::||::.|.
  Rat   343 RMHTGRPHHVEDAGKCCLEDDLVNLE-VLDEDTIIYWLQKRYADALIYTYVGDILIALNPFQNLS 406

  Fly    86 IYTDDHVKAYRNKHFYEMPPHIFAVTDNAFRSLIEENRGQCVLISGESGSGKTEASKKVLQFIA- 149
            ||:....:.|........||||||..|||::.|:..::.||::|||||||||||.:..::|.:. 
  Rat   407 IYSPQFSRLYHGVKRSSNPPHIFASADNAYQCLVTFSKDQCIVISGESGSGKTENAHLIVQHLTF 471

  Fly   150 -ACSGNQTTVEGVKDKLLKSNPVLEAFGNAKTNRNDNSSRFGKYMDIQFDFKGAPIGGNILNYLL 213
             ..:.|||    ::.|:|:.|.::||||||:|..||||||||||:::.|...||.:|..|..|||
  Rat   472 LGKANNQT----LRQKILQVNSLVEAFGNARTAINDNSSRFGKYLEMMFTPTGAVMGARISEYLL 532

  Fly   214 EKSRVVAQMGGERNFHIFYQLLAGA-DEALLQELRLER-------ALDTYSYLTDGLNGTVTRIN 270
            |||||:.|..||:||||||.:.||. .:..|.|.||..       |.:|.....|        |.
  Rat   533 EKSRVIQQAAGEKNFHIFYYIYAGLYHQKKLAEFRLPEEKPPRYIAAETERVTQD--------IT 589

  Fly   271 DADSFKQ----VQQALTVIDFTKEEQREIFGIVASILHLGNVGFTEVEG-----NAKVNSRDLVV 326
            ..:|:::    :|....:|.||.:|...::.|:|.||::||:.|..:..     .::|.:.:.:.
  Rat   590 SKESYRRQFDVIQHCFRIIGFTDKEVHSVYRILAGILNIGNIEFAAISSQHQTDKSEVPNPEALE 654

  Fly   327 TAARLLGVNASELEAALTHRTIDARGDVVTSPLNQELAIYARDALAKAVYDRLFSWLVQRLNISL 391
            .||.:|.:|:.||:.|||...:..||:.:......:.|...|||::||:|.|||||:|.|:|..|
  Rat   655 NAASVLCINSEELQEALTSHCVVTRGETIVRANTVDRAEDVRDAMSKALYGRLFSWIVNRINTLL 719

  Fly   392 QAKETRAS---RNNVMGILDIYGFEIFQKNSFEQFCINFCNEKLQQLFIELTLKSEQDEYRREGI 453
            |..:...|   |.|| |||||:|||.||:|||||.|||..||::|..|.:.....||.||::||:
  Rat   720 QPDKNICSAEDRMNV-GILDIFGFEDFQRNSFEQLCINIANEQVQFYFNQHVFALEQMEYKKEGV 783

  Fly   454 EWIPVEYFDNKVICNLIEEKHKGIISILDEECLRPGEPTDKTFLEKLTQKLAQHHHYVCHEKAPA 518
            :.:.|:|.||:.:.::..:|..|::::||||...| :.||:|.::|....|.      |      
  Rat   784 DAVLVQYEDNRPLLDMFLQKPLGLLALLDEESRFP-QGTDQTLVDKFEDNLR------C------ 835

  Fly   519 HIKKIMLRDE-----FRLVHYAGEVTYSVNGFLDKNNDLLFRDLKETLSKAGNGIVRNCF----- 573
               |...|.:     |.:.||||.|.|..:|.|:||.|.|..|:...|..:.|.:::..|     
  Rat   836 ---KFFWRPKGVELSFGIQHYAGPVLYDASGVLEKNRDTLPADVVVVLRTSENKLLQQLFSIPLT 897

  Fly   574 --------------------------------------PEKELRSLKRPETAITQFRASLNNLMD 600
                                                  || |..::|| :|..:.||.||.:|:.
  Rat   898 KTGNLAQTRARITASSRSLPPHFSAGRAKVDTLEVIRHPE-ETTNMKR-QTMASYFRYSLMDLLS 960

  Fly   601 ILMCKEPSYIRCIKPNDLQTANVFNDELVLHQVKYLGLMENLRVRRAGFAYRRTYELFLERYKSL 665
            .::..:|.::|||||||.:.|..|:.:.||.|::..|::|.:.:||.|:::|..:|.|:.||..|
  Rat   961 KMVVGQPHFVRCIKPNDDRKALQFSQDRVLAQLRSTGILETVSIRRQGYSHRILFEEFVRRYYYL 1025

  Fly   666 SKSTWPNYKGPGGPKAGVQQLVKDLGWDEEKYR-----VGETKLFIRWPRTLFDTEDAYQEKKHE 725
            :      ::....|.|..:..|..|    ||.|     :|:||:|:::          |..::..
  Rat  1026 A------FRAHQTPPANKESCVAIL----EKSRLDHWVLGKTKVFLKY----------YHIEQLN 1070

  Fly   726 I--------AAIIQAHWKGLMQRRKYLKLRAQ----VIIMQS----YCRRKLAQQAAKKRREAAD 774
            :        ..::||:.||.:..|:|.:.:.:    .|.:||    |..|:..:|...:|.|:|.
  Rat  1071 LLLREVMGRVVMLQAYTKGWLGARRYKRAKEKREKSAITIQSAWRGYDTRRKFKQTRHRRNESAA 1135

  Fly   775 KIRAFI------KGFITRNDAPNGFNEEFIANAKRMWLLRLAKELPTKVLDKSW-PH-------- 824
            ..:|.:      |.|.......|..:||            .::..|.:. |..| |.        
  Rat  1136 HTQAVLQTTPDEKRFPDSGVESNSRHEE------------TSRNCPAEA-DTDWHPQTQSSPASS 1187

  Fly   825 --APGHCEEASG 834
              ..||.::.:|
  Rat  1188 DVTSGHADKEAG 1199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myo61FNP_476934.2 MYSc_Myo1 52..707 CDD:276829 253/729 (35%)
Myosin_TH1 863..1049 CDD:461801
Myo3bNP_001380706.1 Protein Kinases, catalytic domain 20..310 CDD:473864
MYSc_Myo3 373..1062 CDD:276830 253/729 (35%)
IQ 1102..1124 CDD:197470 5/21 (24%)
Blue background indicates that the domain is not in the aligned region.

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