DRSC/TRiP Functional Genomics Resources

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Protein Alignment Myo61F and Mhc

DIOPT Version :10

Sequence 1:NP_476934.2 Gene:Myo61F / 38153 FlyBaseID:FBgn0010246 Length:1052 Species:Drosophila melanogaster
Sequence 2:NP_523587.4 Gene:Mhc / 35007 FlyBaseID:FBgn0264695 Length:1962 Species:Drosophila melanogaster


Alignment Length:1070 Identity:325/1070 - (30%)
Similarity:513/1070 - (47%) Gaps:190/1070 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 YQSEEAFIGNLKKRFQEDLIYTYIGQVLISVNPYKQLPIYTDDHVKAYRNKHFYEMPPHIFAVTD 112
            |.::.:.:.||::|:...|||||.|...:::||||:.|:||:...|.||.|...|:||||||::|
  Fly    96 YLNDASVLHNLRQRYYNKLIYTYSGLFCVAINPYKRYPVYTNRCAKMYRGKRRNEVPPHIFAISD 160

  Fly   113 NAFRSLIEENRGQCVLISGESGSGKTEASKKVLQFIAACSGNQTTVEGVK------DKLLKSNPV 171
            .|:..::..:..|.:||:||||:||||.:|||:.:.|....::.|.|..|      |:::::|||
  Fly   161 GAYVDMLTNHVNQSMLITGESGAGKTENTKKVIAYFATVGASKKTDEAAKSKGSLEDQVVQTNPV 225

  Fly   172 LEAFGNAKTNRNDNSSRFGKYMDIQFDFKGAPIGGNILNYLLEKSRVVAQMGGERNFHIFYQLLA 236
            |||||||||.||||||||||::.|.|...|...|.:|..|||||:||::|...||::|||||:::
  Fly   226 LEAFGNAKTVRNDNSSRFGKFIRIHFGPTGKLAGADIETYLLEKARVISQQSLERSYHIFYQIMS 290

  Fly   237 GADEALLQELRLERALDTYSYLTDGLNGTVTRINDADSFKQVQQALTVIDFTKEEQREIFGIVAS 301
            |:...:.....|...:..|..::.| ..||..|:||:.|....||..::.|||:|:.:::.|.|:
  Fly   291 GSVPGVKDICLLTDNIYDYHIVSQG-KVTVASIDDAEEFSLTDQAFDILGFTKQEKEDVYRITAA 354

  Fly   302 ILHLGNVGFTE--VEGNAKVNSRDLVVTAARLLGVNASELEAALTHRTIDARGDVVTSPLNQELA 364
            ::|:|.:.|.:  .|..|:.:..:.....::|.|.:.:||...|....|....:.||...|.:..
  Fly   355 VMHMGGMKFKQRGREEQAEQDGEEEGGRVSKLFGCDTAELYKNLLKPRIKVGNEFVTQGRNVQQV 419

  Fly   365 IYARDALAKAVYDRLFSWLVQRLNISLQAKETRASRNNVMGILDIYGFEIFQKNSFEQFCINFCN 429
            ..:..||.|.|:||||.|||::.|.:|   :|:..|.:.:|:|||.|||||:.|.|||.||||.|
  Fly   420 TNSIGALCKGVFDRLFKWLVKKCNETL---DTQQKRQHFIGVLDIAGFEIFEYNGFEQLCINFTN 481

  Fly   430 EKLQQLFIELTLKSEQDEYRREGIEWIPVEYFDNKVICNLIEEKHKGIISILDEECLRPGEPTDK 494
            |||||.|.......||:||:||||||..:::..:..:|..:.||..||:|||:||.:.| :.||:
  Fly   482 EKLQQFFNHHMFVLEQEEYQREGIEWTFIDFGMDLQLCIDLIEKPMGILSILEEESMFP-KATDQ 545

  Fly   495 TFLEKLTQKLAQHHHYVCHEKAPAHIKKIMLRDEFRLVHYAGEVTYSVNGFLDKNNDLLFRDLKE 559
            ||.||||.   .|.......:.|...|.......|.:.||||.|:|::.|:|:||.|.|...:.:
  Fly   546 TFSEKLTN---THLGKSAPFQKPKPPKPGQQAAHFAIAHYAGCVSYNITGWLEKNKDPLNDTVVD 607

  Fly   560 TLSKAGNGIVRNCFPE-----------KELRSLKRP--ETAITQFRASLNNLMDILMCKEPSYIR 611
            ...|:.|.::...|.:           |..|..|..  .|..:.::..||:||..|...:|.::|
  Fly   608 QFKKSQNKLLIEIFADHAGQSGGGEQAKGGRGKKGGGFATVSSAYKEQLNSLMTTLRSTQPHFVR 672

  Fly   612 CIKPNDLQTANVFNDELVLHQVKYLGLMENLRVRRAGFAYRRTYELFLERYKSLSKSTWPNYKGP 676
            ||.||:::...|.:..||:||:...|::|.:|:.|.||..|..|..|..|||.:....   .:|.
  Fly   673 CIIPNEMKQPGVVDAHLVMHQLTCNGVLEGIRICRKGFPNRMMYPDFKMRYKIMCPKL---LQGV 734

  Fly   677 GGPKAGVQQLVKDLGWDEEKYRVGETKLFIRWPRTLFDTEDAYQEKKHEIAAIIQAHWKGLMQRR 741
            ...|...:.::|.:...|::||:|.||:|.| ...|...|:...|:..:|.:.:||..:|.:.|:
  Fly   735 EKDKKATEIIIKFIDLPEDQYRLGNTKVFFR-AGVLGQMEEFRDERLGKIMSWMQAWARGYLSRK 798

  Fly   742 KYLKLRAQVI---IMQSYCRRKL-----------------------------AQQAAKKRRE--A 772
            .:.||:.|.:   ::|...|:.|                             .::.|||..|  |
  Fly   799 GFKKLQEQRVALKVVQRNLRKYLQLRTWPWYKLWQKVKPLLNVSRIEDEIARLEEKAKKAEELHA 863

  Fly   773 AD-KIR---------------AFIKGFITRNDAPNGFNEEFIANAKRMWLLRLAKELPTKVLDKS 821
            |: |:|               |.:........|...:.|.   |||   |.....:|..::.|  
  Fly   864 AEVKVRKELEALNAKLLAEKTALLDSLSGEKGALQDYQER---NAK---LTAQKNDLENQLRD-- 920

  Fly   822 WPHAPGHCEEASGILHRLHRLHLARIYRLKLTPQQKRQFELKVLAEKVFKGKKNNYAS---SVST 883
                         |..||.:...||          .:.|:.|..|::...|.|.:...   :|..
  Fly   921 -------------IQERLTQEEDAR----------NQLFQQKKKADQEISGLKKDIEDLELNVQK 962

  Fly   884 WFQEDRIPKEH-IQRVNDFVASTFGSEQLKYQSFCTKFDRHGYKSRDRFILLSNKAIYVLDGKT- 946
             .::|:..|:| |:.:||.:|                       .:|..|...||. ..:.|:| 
  Fly   963 -AEQDKATKDHQIRNLNDEIA-----------------------HQDELINKLNKE-KKMQGETN 1002

  Fly   947 -------------------YKQKHRLPLDKIDFTLTNHNDDLMVIRIPLDLKKDK----GDLILI 988
                               .|.|....||:::.:|....      ::..|::|.|    |||.| 
  Fly  1003 QKTGEELQAAEDKINHLNKVKAKLEQTLDELEDSLEREK------KVRGDVEKSKRKVEGDLKL- 1060

  Fly   989 IPRIIEFSTYIIDTVGTASIVSIVDRNSLE 1018
                            |...|:.::||..|
  Fly  1061 ----------------TQEAVADLERNKKE 1074

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myo61FNP_476934.2 MYSc_Myo1 52..707 CDD:276829 251/675 (37%)
Myosin_TH1 863..1049 CDD:461801 35/184 (19%)
MhcNP_523587.4 Myosin_N 33..75 CDD:460670
MYSc_Myh1_insects_crustaceans 100..765 CDD:276874 251/675 (37%)
Myosin_tail_1 842..1922 CDD:460256 58/312 (19%)
Blue background indicates that the domain is not in the aligned region.

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