DRSC/TRiP Functional Genomics Resources

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Protein Alignment Myo61F and Myo1a

DIOPT Version :10

Sequence 1:NP_476934.2 Gene:Myo61F / 38153 FlyBaseID:FBgn0010246 Length:1052 Species:Drosophila melanogaster
Sequence 2:NP_062197.1 Gene:Myo1a / 299509 RGDID:3135 Length:1043 Species:Rattus norvegicus


Alignment Length:1040 Identity:461/1040 - (44%)
Similarity:646/1040 - (62%) Gaps:68/1040 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 GVQDFVLLENYQSEEAFIGNLKKRFQEDLIYTYIGQVLISVNPYKQLPIYTDDHVKAYRNKHFYE 102
            ||:|.:|||.. .||:.|.||:.|:::..||||||.|:||:|||:|||||..:.:..||:..|||
  Rat     9 GVEDLILLEPL-DEESLIKNLQLRYEKKEIYTYIGNVVISMNPYQQLPIYGPEFIAKYRDYTFYE 72

  Fly   103 MPPHIFAVTDNAFRSLIEENRGQCVLISGESGSGKTEASKKVLQFIAACSGNQTTVEGVKDKLLK 167
            :.|||:|:.:.|::||.:.:|.||:||:||||:|||||||.|:.::||..|....|..||::||:
  Rat    73 LKPHIYALANVAYQSLKDRDRDQCILITGESGAGKTEASKLVMSYVAAVCGKGEQVNSVKEQLLQ 137

  Fly   168 SNPVLEAFGNAKTNRNDNSSRFGKYMDIQFDFKGAPIGGNILNYLLEKSRVVAQMGGERNFHIFY 232
            |||||||||||||.||||||||||||||:|||||:|:||.|.||||||||||.|:.|||||||||
  Rat   138 SNPVLEAFGNAKTIRNDNSSRFGKYMDIEFDFKGSPLGGVITNYLLEKSRVVKQLKGERNFHIFY 202

  Fly   233 QLLAGADEALLQELRLERALDTYSYLTDGLNGTVTRIN---DADSFKQVQQALTVIDFTKEEQRE 294
            |||||||..||:.|:||.....|:|    |||.|:|:|   ||.:|:.||.|:.||.|::||.|:
  Rat   203 QLLAGADTQLLKALKLEEDARGYAY----LNGEVSRVNGMDDASNFRAVQNAMAVIGFSEEEIRQ 263

  Fly   295 IFGIVASILHLGNVGFT-EVEGN----AKVNSRDLVVTAARLLGVNASELEAALTHRTIDARGDV 354
            :..:.|.:|.||||... |.:.|    :.|.....:.....::|:|::|||.||..||::...:.
  Rat   264 VLEVTALVLKLGNVKLADEFQANGLPASGVCDGKGIQEIGEMMGLNSAELEKALCSRTMETGKEK 328

  Fly   355 VTSPLNQELAIYARDALAKAVYDRLFSWLVQRLNISLQAKETRASRNNVMGILDIYGFEIFQKNS 419
            |.:.||...|.||||||||.:|.|||.|:|.|:|.|:  |.....:..|||:||||||||.:.||
  Rat   329 VVTVLNVIQAQYARDALAKNIYSRLFDWIVNRINESI--KVGTGEKRKVMGVLDIYGFEILEDNS 391

  Fly   420 FEQFCINFCNEKLQQLFIELTLKSEQDEYRREGIEWIPVEYFDNKVICNLIEEKHKGIISILDEE 484
            ||||.||:|||||||:|||||||.||:||:||||.|..||||||.:||:|||...:||:::||||
  Rat   392 FEQFVINYCNEKLQQVFIELTLKEEQEEYKREGIPWTKVEYFDNGIICDLIEHSQRGILAMLDEE 456

  Fly   485 CLRPGEPTDKTFLEKLTQKLAQHHHYVCH--EKAPAHIKKIMLRDEFRLVHYAGEVTYSVNGFLD 547
            |||||..:|.|||.||.|..::|.||...  :.|.....:.|....||:.||||:|||:|..|:|
  Rat   457 CLRPGVVSDTTFLAKLNQLFSKHSHYESKVTQNAQRQYDRTMGLSCFRICHYAGKVTYNVTSFID 521

  Fly   548 KNNDLLFRDLKETLSKAGNGIVRNCFPE---KELRSLKRPETAITQFRASLNNLMDILMCKEPSY 609
            ||||||||||.:|:.||.:.::.:.|||   || .|||||.||.|||:.|:..||..|..|.|:|
  Rat   522 KNNDLLFRDLSQTMWKAQHPLLHSLFPEGNPKE-ASLKRPPTAGTQFKNSVAILMKNLYSKNPNY 585

  Fly   610 IRCIKPNDLQTANVFNDELVLHQVKYLGLMENLRVRRAGFAYRRTYELFLERYKSLSKSTWPNYK 674
            ||||||||.|....|..|||:.|.:||||:||:||||||:|:|:.|:.|||||:.||:||||.:.
  Rat   586 IRCIKPNDQQQQGRFTSELVMVQARYLGLLENVRVRRAGYAFRQAYKPFLERYRLLSRSTWPRWN 650

  Fly   675 GPGGPKAGVQQLVKDLGWDEEKYRVGETKLFIRWPRTLFDTEDAYQEKKHEIAAIIQAHWKGLMQ 739
            |.  .:.||::::..|....|:...|.||:|||.|:|||..|:..:.:..::|.:||..::|...
  Rat   651 GE--DREGVEKVLGSLILSSEELAYGRTKIFIRSPKTLFYLEEQRRLRLQQLATLIQKVYRGWRC 713

  Fly   740 RRKYLKLRAQVIIMQSYCRRKLAQQAAKKRREAADKIRAFIKGFITRNDAPNGFNE-------EF 797
            |..|.::|...|::.::.|....::...|.|.:...|:||::|:..|.:....|..       .|
  Rat   714 RTHYQQMRKSQILISAWFRGNKQKKHYGKIRSSVLLIQAFVRGWKARKNYRKYFRSGAAITLANF 778

  Fly   798 I-ANAKRMWLLRLAKELP-TKVLDKSWPHAPGHC-EEASGILHRLHRLHLARIYRLKLTPQQKRQ 859
            | .:..:.:||.|.|.|| |||||.:||.||..| ..|:..|..|......:.||.:|:|:|.:.
  Rat   779 IYQSITQKFLLNLKKNLPSTKVLDNTWPAAPYRCFNTANQELQHLFYQWKCKKYRDQLSPKQVQT 843

  Fly   860 FELKVLAEKVFKGKKNNYASSVSTWFQEDRI-----PKEHIQRVND------FVASTFGSEQLKY 913
            ...|:.|.::|||||.:|..||...|:.|.:     ||  :||:..      .||.|        
  Rat   844 LREKLCASELFKGKKASYLQSVPVPFRGDYVGLQGNPK--LQRLKGREEGPVLVADT-------- 898

  Fly   914 QSFCTKFDRHGYKSRDRFILLSNKAIYVLDGKTYKQKHRLPLDKI-DFTLTNHNDDLMVIRI-PL 976
               ..|.:|...|:..|.:||:...:.:.|.|..:.:..:.|:.: ..::|:..|.|..:.: .:
  Rat   899 ---VKKVNRGNGKTSSRILLLTKGHVILTDAKKSQAQIVIKLEDVAGVSVTSLEDGLFSLHLSEM 960

  Fly   977 DLKKDKGDLILIIPRIIEFST----YIIDTVGTASIVSIVDRNSLEHNVVKGKGGVIDIQTGAEP 1037
            .....|||::||...::|..|    .::|.......|::.::.|     |:.|.|.:.::....|
  Rat   961 SSAASKGDILLISDHLVELLTKMYQAVLDATQRQLPVTVTEKFS-----VRFKEGSVAVKVTQGP 1020

  Fly  1038  1037
              Rat  1021  1020

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myo61FNP_476934.2 MYSc_Myo1 52..707 CDD:276829 359/667 (54%)
Myosin_TH1 863..1049 CDD:461801 45/192 (23%)
Myo1aNP_062197.1 MYSc_Myo1 22..681 CDD:276829 359/667 (54%)
IQ 742..764 CDD:197470 7/21 (33%)
Myosin_TH1 847..1042 CDD:461801 45/192 (23%)

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