DRSC/TRiP Functional Genomics Resources

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Protein Alignment Myo61F and Myh9

DIOPT Version :10

Sequence 1:NP_476934.2 Gene:Myo61F / 38153 FlyBaseID:FBgn0010246 Length:1052 Species:Drosophila melanogaster
Sequence 2:NP_037326.2 Gene:Myh9 / 25745 RGDID:3140 Length:1960 Species:Rattus norvegicus


Alignment Length:1002 Identity:329/1002 - (32%)
Similarity:526/1002 - (52%) Gaps:134/1002 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 SEEAFIGNLKKRFQEDLIYTYIGQVLISVNPYKQLPIYTDDHVKAYRNKHFYEMPPHIFAVTDNA 114
            :|.:.:.|||:|:...|||||.|...:.:||||.||||:::.|..|:.|..:||||||:|:||.|
  Rat    93 NEASVLHNLKERYYSGLIYTYSGLFCVVINPYKNLPIYSEEIVDMYKGKKRHEMPPHIYAITDTA 157

  Fly   115 FRSLIEENRGQCVLISGESGSGKTEASKKVLQFIA--ACSGNQTTVEG-VKDKLLKSNPVLEAFG 176
            :||::::...|.:|.:||||:||||.:|||:|::|  |.|......:| ::.:||::||:|||||
  Rat   158 YRSMMQDREDQSILCTGESGAGKTENTKKVIQYLAHVASSHKSKKDQGELERQLLQANPILEAFG 222

  Fly   177 NAKTNRNDNSSRFGKYMDIQFDFKGAPIGGNILNYLLEKSRVVAQMGGERNFHIFYQLLAGADEA 241
            ||||.:|||||||||::.|.||..|..:|.||..|||||||.:.|...||.|||||.||:||.|.
  Rat   223 NAKTVKNDNSSRFGKFIRINFDVNGYIVGANIETYLLEKSRAIRQAKEERTFHIFYYLLSGAGEH 287

  Fly   242 LLQELRLERALDTYSYLTDGLNGTVTRINDADSFKQVQQALTVIDFTKEEQREIFGIVASILHLG 306
            |..:|.|| ..:.|.:|::| :.|:....|.|.|::..:|:.::...::||..:..:::.:|.||
  Rat   288 LKTDLLLE-PYNKYRFLSNG-HVTIPGQQDKDMFQETMEAMRIMGIPEDEQMGLLRVISGVLQLG 350

  Fly   307 NVGFTEVEGNAKVNSRDLVVTAAR----LLGVNASELEAALTHRTIDARGDVVTSPLNQELAIYA 367
            |:.|.:.....:.:..|  .|||:    |||:|.::....:....|....|.|.....:|.|.:|
  Rat   351 NIVFKKERNTDQASMPD--NTAAQKVSHLLGINVTDFTRGILTPRIKVGRDYVQKAQTKEQADFA 413

  Fly   368 RDALAKAVYDRLFSWLVQRLNISLQAKETRASRNNVMGILDIYGFEIFQKNSFEQFCINFCNEKL 432
            .:|||||.|:|:|.|||.|:|.:|.  :|:....:.:|||||.|||||..|||||.|||:.||||
  Rat   414 IEALAKATYERMFRWLVLRINKALD--KTKRQGASFIGILDIAGFEIFDLNSFEQLCINYTNEKL 476

  Fly   433 QQLFIELTLKSEQDEYRREGIEWIPVEY-FDNKVICNLIEEK--HKGIISILDEECLRPGEPTDK 494
            ||||.......||:||:||||||..::: .|.:...:|||:.  ..||:::|||||..| :.|||
  Rat   477 QQLFNHTMFILEQEEYQREGIEWNFIDFGLDLQPCIDLIEKPAGPPGILALLDEECWFP-KATDK 540

  Fly   495 TFLEKLTQKLAQHHHYVCHEKAPAHIKKIMLRD--EFRLVHYAGEVTYSVNGFLDKNNDLLFRDL 557
            :|:||:.|:...|         |...|...|:|  :|.::||||:|.|..:.:|.||.|.|..::
  Rat   541 SFVEKVVQEQGTH---------PKFQKPKQLKDKADFCIIHYAGKVDYKADEWLMKNMDPLNDNI 596

  Fly   558 KETLSKAGNGIVRNCFPEKE-LRSLKR----PETAI---------------TQFRASLNNLMDIL 602
            ...|.::.:..|...:.:.: :..|.:    .|||:               ..::..|..||..|
  Rat   597 ATLLHQSSDKFVSELWKDVDRIIGLDQVAGMSETALPGAFKTRKGMFRTVGQLYKEQLAKLMATL 661

  Fly   603 MCKEPSYIRCIKPNDLQTANVFNDELVLHQVKYLGLMENLRVRRAGFAYRRTYELFLERYKSLSK 667
            ....|:::|||.||..:.|...:..|||.|::..|::|.:|:.|.||..|..::.|.:||:.|:.
  Rat   662 RNTNPNFVRCIIPNHEKKAGKLDPHLVLDQLRCNGVLEGIRICRQGFPNRVVFQEFRQRYEILTP 726

  Fly   668 STWPNYKGPGGPKAGVQQLVKDLGWDEEKYRVGETKLFIRWPRTLFDTEDAYQEKKHEIAAIIQA 732
            ::.|  ||....|.....::|.|..|...||:|::|:|.|                    |.:.|
  Rat   727 NSIP--KGFMDGKQACVLMIKALELDSNLYRIGQSKVFFR--------------------AGVLA 769

  Fly   733 HWKGLMQRRKYLKLRAQVIIMQSYCRRKLAQQAAKKRREAADKIRAFIKGFITRNDAPNGFNEEF 797
            |    ::..:.||:...:|..|:.||..||::|..||::....::.     :.||.|.       
  Rat   770 H----LEEERDLKITDVIIGFQACCRGYLARKAFAKRQQQLTAMKV-----LQRNCAA------- 818

  Fly   798 IANAKRMWLLRLAK----ELPTKVLDKSWPHAPGHCEE---ASGILHRLHRLHLARIYRLKLTPQ 855
                    .|||..    .|.|||  |...::..|.:|   ....|.::...|||...|  ||..
  Rat   819 --------YLRLRNWQWWRLFTKV--KPLLNSIRHEDELLAKEAELTKVREKHLAAENR--LTEM 871

  Fly   856 QKRQFELKVLAEKVFKGKKNNYASSVSTWFQEDR----IPKEHIQRV-NDFVASTFGSEQLKYQS 915
            :..|.:|  :|||:...::....:.:....:|.|    ..|:.::.: :|..|.....|      
  Rat   872 ETMQSQL--MAEKLQLQEQLQAETELCAEAEELRARLTAKKQELEEICHDLEARVEEEE------ 928

  Fly   916 FCTKFDRHGYKSRDRFILLSNKAIYVLDGKTYKQ---KHRLPLDKI--DFTLTNHNDDLMVIRIP 975
                 :|..|...::..:..|  |..|:.:..::   :.:|.|:|:  :..|....:|.:::...
  Rat   929 -----ERCQYLQAEKKKMQQN--IQELEEQLEEEESARQKLQLEKVTTEAKLKKLEEDQIIMEDQ 986

  Fly   976 -LDLKKDKGDLILIIPRIIEFSTYIID 1001
             ..|.|:|.   |:..|:.||:|.:::
  Rat   987 NCKLAKEKK---LLEDRVAEFTTNLME 1010

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myo61FNP_476934.2 MYSc_Myo1 52..707 CDD:276829 264/686 (38%)
Myosin_TH1 863..1049 CDD:461801 27/150 (18%)
Myh9NP_037326.2 Myosin_N 27..72 CDD:460670
Motor_domain 95..764 CDD:473979 264/686 (38%)
Myosin_tail_1 842..1921 CDD:460256 38/189 (20%)
Blue background indicates that the domain is not in the aligned region.

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