DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Myo61F and Myo1e

DIOPT Version :10

Sequence 1:NP_476934.2 Gene:Myo61F / 38153 FlyBaseID:FBgn0010246 Length:1052 Species:Drosophila melanogaster
Sequence 2:NP_775124.1 Gene:Myo1e / 25484 RGDID:3144 Length:1107 Species:Rattus norvegicus


Alignment Length:966 Identity:382/966 - (39%)
Similarity:556/966 - (57%) Gaps:111/966 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 HERDRAGVQDFVLLENYQSEEAFIGNLKKRFQEDLIYTYIGQVLISVNPYKQLPIYTDDHVKAYR 96
            |....:||.|.|||... :|.:.:.|||||:.:|.|:||||.|||||||:||:|.:.:..::.|:
  Rat    14 HNVKHSGVDDMVLLSKI-TESSIVENLKKRYMDDYIFTYIGSVLISVNPFKQMPYFGEKEIEMYQ 77

  Fly    97 NKHFYEMPPHIFAVTDNAFRSLIEENRGQCVLISGESGSGKTEASKKVLQFIAACSGNQTTVEGV 161
            ....||.||||:|:.|:.:|::|.:...|||:||||||:|||.|:|.::.:::..||....|:.|
  Rat    78 GAAQYENPPHIYALADSMYRNMIIDRENQCVIISGESGAGKTVAAKYIMSYVSRVSGGGPKVQHV 142

  Fly   162 KDKLLKSNPVLEAFGNAKTNRNDNSSRFGKYMDIQFDFKGAPIGGNILNYLLEKSRVVAQMGGER 226
            ||.:|:|||:|||||||||.||:||||||||.:|||...|.|.||.|.|:||||||||.:..|||
  Rat   143 KDIILQSNPLLEAFGNAKTVRNNNSSRFGKYFEIQFSPGGEPDGGKISNFLLEKSRVVMRNPGER 207

  Fly   227 NFHIFYQLLAGADEALLQELRLERALDTYSYLTDGLNGT--VTRINDADSFKQVQQALTVIDFTK 289
            :|||||||:.||.....|.|.: .::|.|.||:  |:|:  |..|:|...|::...|:.||....
  Rat   208 SFHIFYQLIEGASPEQKQSLGI-TSMDYYYYLS--LSGSYKVDDIDDKRDFQETLHAMNVIGIFS 269

  Fly   290 EEQREIFGIVASILHLGNVGFTEVEGNAKVNSRDLVVTAARLLGVNASELEAALTHRTIDA---- 350
            |||..:..|||.||||||:.|.||...|.|.|.:.:...|.|||:|...|:..||.|.:|:    
  Rat   270 EEQTLVLQIVAGILHLGNINFKEVGNYAAVESEEFLAFPAYLLGINQDRLKEKLTSRQMDSKWGG 334

  Fly   351 RGDVVTSPLNQELAIYARDALAKAVYDRLFSWLVQRLNISLQAKETRASRNNVMGILDIYGFEIF 415
            :.:.:...||.|.|.|.|||||||::.|:|.:||..:|   :|.|......|: |:|||||||||
  Rat   335 KSESIHVTLNVEQACYTRDALAKALHARVFDFLVDSIN---KAMEKDHEEYNI-GVLDIYGFEIF 395

  Fly   416 QKNSFEQFCINFCNEKLQQLFIELTLKSEQDEYRREGIEWIPVEYFDNKVICNLIEEK--HKGII 478
            |||.||||||||.||||||:|||||||:||:||.:|||.|.|:|||:||::|:|||.|  ..||:
  Rat   396 QKNGFEQFCINFVNEKLQQIFIELTLKAEQEEYVQEGIRWTPIEYFNNKIVCDLIESKVNPPGIM 460

  Fly   479 SILDEECL---RPGEPTDKTFLEKLTQKLAQHHHYVCHEKAPAHIKKIMLRDEFRLVHYAGEVTY 540
            ||||:.|.   ..||..|:|.|:||..::..|.|:....:.            |.:.||||:|:|
  Rat   461 SILDDVCATMHAVGEGADQTLLQKLQMQIGSHEHFNSWNQG------------FIIHHYAGKVSY 513

  Fly   541 SVNGFLDKNNDLLFRDLKETLSKAGNGIVRNCFPEKELRSLK-RPETAITQFRASLNNLMDILMC 604
            .::||.::|.|:||.||.|.:..:....:::.|||......| ||.||.::.:...|:|:..||.
  Rat   514 DMDGFCERNRDVLFMDLIELMQSSELPFIKSLFPENLQADKKGRPTTAGSKIKKQANDLVSTLMK 578

  Fly   605 KEPSYIRCIKPNDLQTANVFNDELVLHQVKYLGLMENLRVRRAGFAYRRTYELFLERYKSLSKST 669
            ..|.||||||||:.:....:.:..|.|||:||||.||:||||||:||||.::.||:||..|:|:|
  Rat   579 CTPHYIRCIKPNETKKPKDWEESRVKHQVEYLGLKENIRVRRAGYAYRRVFQKFLQRYAILTKAT 643

  Fly   670 WPNYKGPGGPKAGVQQLVKDLGWDEEKYRVGETKLFIRWPRTLFDTEDAYQEKKHEIAAIIQAHW 734
            ||.::  |..|.||..|::.:..|.:::::|.:|:||:.|.:||..|:..:.|....|.:||..|
  Rat   644 WPVWR--GDEKQGVLHLLQSVNMDSDQFQLGRSKVFIKAPESLFLLEEMRERKYDGYARVIQKTW 706

  Fly   735 KGLMQRRKYLKLR--AQVIIMQSYCRRK-------------------LAQQAAKKRR-EAADKIR 777
            :..:.|:||:::|  |..:::....||:                   |.|...|:.: :.||.:.
  Rat   707 RKFVARKKYVQMREDASDLLLNKKERRRNSINRNFIGDYIGMEEHPELQQFVGKREKIDFADIVT 771

  Fly   778 AFIKGFITRNDAPNGFNEEFIANAKRMWLL--RLAKELPTKVLDKSWPHAPGHCEEASGILHRLH 840
            .:.:.|       .|...:.:...|.::|:  ...|:.|.|.|.|.             :|.|  
  Rat   772 KYDRRF-------KGVKRDLLLTPKCLYLIGREKVKQGPDKGLVKE-------------VLKR-- 814

  Fly   841 RLHLARIYRLKLTPQQKRQF-----ELKVLAEKVFKGKKNNYASSVSTWFQE---DRIPKE---- 893
            ::.:.||..:.|:..|...|     |...|.|.||   |..:.|.::..::|   .::|.:    
  Rat   815 KIEVERILSVSLSTMQDDIFILHEQEYDSLLESVF---KTEFLSLLTKRYEEKTQKQLPLKFSNT 876

  Fly   894 ---HIQRVNDFVASTFGSEQLK-YQSFCTKFDRHGYKSRDRFILL-SNKAIYVLDG 944
               .:::.|....|..||.|:: ||.|           .|..||. |||.:.|..|
  Rat   877 LELKLKKENWGPWSAGGSRQVQFYQGF-----------GDLAILKPSNKVLQVSIG 921

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myo61FNP_476934.2 MYSc_Myo1 52..707 CDD:276829 311/666 (47%)
Myosin_TH1 863..1049 CDD:461801 24/94 (26%)
Myo1eNP_775124.1 MYSc_Myo1 33..679 CDD:276829 311/666 (47%)
Actin-binding. /evidence=ECO:0000255 581..591 8/9 (89%)
Myosin_TH1 719..920 CDD:461801 49/236 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 920..1052 1/2 (50%)
SH3_MyoIe_If_like 1055..1106 CDD:212761
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.