DRSC/TRiP Functional Genomics Resources

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Protein Alignment Myo61F and Myo5c

DIOPT Version :10

Sequence 1:NP_476934.2 Gene:Myo61F / 38153 FlyBaseID:FBgn0010246 Length:1052 Species:Drosophila melanogaster
Sequence 2:XP_006510998.1 Gene:Myo5c / 208943 MGIID:2442485 Length:1749 Species:Mus musculus


Alignment Length:1071 Identity:345/1071 - (32%)
Similarity:531/1071 - (49%) Gaps:170/1071 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 GVQDFVLLENYQSEEAFIGNLKKRFQED-LIYTYIGQVLISVNPYKQLPIYTDDHVKAYRNKHFY 101
            |..|...| :|..|.|.:.||:.||.|. |||||.|.:|:::|||||||||.|..:.||..::..
Mouse    68 GENDLTAL-SYLHEPAVLHNLRIRFAESKLIYTYSGIILVAMNPYKQLPIYGDAIIHAYSGQNMG 131

  Fly   102 EMPPHIFAVTDNAFRSLIEENRGQCVLISGESGSGKTEASKKVLQFIAACSGNQTTVEGVKDKLL 166
            :|.||||||.:.|::.:...||.|.:::|||||:|||.:::..:::.|..|.:.:... |:||:|
Mouse   132 DMDPHIFAVAEEAYKQMARNNRNQSIIVSGESGAGKTVSARYAMRYFATVSKSSSNAH-VEDKVL 195

  Fly   167 KSNPVLEAFGNAKTNRNDNSSRFGKYMDIQFDFKGAPIGGNILNYLLEKSRVVAQMGGERNFHIF 231
            .|||:.||.|||||.|||||||||||.:|.||.:...||.|:..|||||||||.|...|||:|||
Mouse   196 ASNPITEAVGNAKTTRNDNSSRFGKYTEISFDERNQIIGANMRTYLLEKSRVVFQSENERNYHIF 260

  Fly   232 YQLLAGADEALLQELRLERALDTYSYLTDGLNGTVTRINDADSFKQVQQALTVIDFTKEEQREIF 296
            |||.|.|.::..:.|:|..| :.::|...|.|..:..:||.....:.|:..|::.|.|:.|.::|
Mouse   261 YQLCASAQQSEFKHLKLGSA-EEFNYTRMGGNTVIEGVNDRADMVETQKTFTLLGFKKDFQMDVF 324

  Fly   297 GIVASILHLGNVGFTEVEGN--AKVNSRDL-VVTAARLLGVNASELEAALTHRTIDARGDVVTSP 358
            .|:|:|||||||..|.| ||  :.|:..|. :.....|||:..|::...|.:|.|....:.|..|
Mouse   325 KILAAILHLGNVQVTTV-GNERSSVSEDDSHLKVFCELLGLETSKVAQWLCNRKIVTSSETVVKP 388

  Fly   359 LNQELAIYARDALAKAVYDRLFSWLVQRLNISLQAKETRASRNNVMGILDIYGFEIFQKNSFEQF 423
            :.:..||.|||||||.:|..||.::|:::|   ||......::..:|:|||||||.|..||||||
Mouse   389 MTRPQAINARDALAKKIYAHLFDFIVEQIN---QALHFSGKQHTFIGVLDIYGFETFDVNSFEQF 450

  Fly   424 CINFCNEKLQQLFIELTLKSEQDEYRREGIEWIPVEYFDNKVICNLIEEKHKGIISILDEECLRP 488
            |||:.||||||.|.....|.||:||.:|.|.|..::::||:.:.:|||.| .||:.:||||||.|
Mouse   451 CINYANEKLQQQFNLHVFKLEQEEYMKEDIPWTLIDFYDNQPVIDLIEAK-MGILELLDEECLLP 514

  Fly   489 GEPTDKTFLEKLTQKLAQHHHYVCHEKAPAHIKKIMLRDEFRLVHYAGEVTYSVNGFLDKNNDLL 553
             ..||:.:|:||      ::::|  .|.....|..|....|.:.|:|.:|.|...|||:||.|.:
Mouse   515 -HGTDENWLQKL------YNNFV--NKNSLFEKPRMSNSSFIIQHFADKVEYQCEGFLEKNRDTV 570

  Fly   554 FRDLKETLSKAGNGIVRNCFPE--------------KELRSLKRPE------TAITQFRASLNNL 598
            :..|.|.|..:...:....|.|              |..:.:.:|.      |...:||:||..|
Mouse   571 YDMLVEILRASKFHLCAAFFQESPVPSSPFGAMITVKSAKQVIKPNTKHFRTTVGNKFRSSLYLL 635

  Fly   599 MDILMCKEPSYIRCIKPNDLQTANVFNDELVLHQVKYLGLMENLRVRRAGFAYRRTYELFLERY- 662
            |:.|....|.|:|||||||.:....|:.:.::.|::..|::|.:|:....:..|.||..|..|| 
Mouse   636 METLNATTPHYVRCIKPNDEKMPFEFDSKRIVQQLRACGVLETIRISAQSYPSRWTYLEFYSRYG 700

  Fly   663 -----KSLSKSTWPNYKGPGGPKAGVQQLVKDLGWDEEKYRVGETKLFIRWPRTLFDTEDAYQEK 722
                 :.||.|         ..|...:.::..|..|..:|:.|.||:|.|..:..: .|....:|
Mouse   701 ILMTQQELSLS---------DKKEVCKVVLHRLIQDSNQYQFGRTKIFFRAGQVAY-LEKLRLDK 755

  Fly   723 KHEIAAIIQAHWKGLMQRRKYLK-----------LRAQ-----------------VIIMQSYCRR 759
            ..:...:||.|.:|.:||||:|:           .|.|                 .||:|.|||.
Mouse   756 LRQDCIMIQKHVRGWLQRRKFLRERQAALTIQRYFRGQQTVRKAITATALKEAWAAIILQKYCRG 820

  Fly   760 KLAQQAAKKRREAADKIRAFIKGFITRNDAPNGFNEE---FIANAKRMWLLR------------- 808
            .|.:...:..|.|...|:|..:||:.|........|.   .:....|.||.|             
Mouse   821 YLVRNLYQLIRVATITIQAHTRGFLARRRYRKLLQEHKAVILQKYARAWLARRRFQNIRRFVLNI 885

  Fly   809 ----LAKELPTKVLDKSWPHAPGHCEEASGILHRLHRLHLARIYRLKLTPQQKRQFELKVLAEKV 869
                ..:.|..|:.|::        .|..|::.:|..|...|:..|:...:.:.:.|........
Mouse   886 QLTYRVQRLQKKLEDQN--------RENHGLVEKLTSLAALRVGDLEKVQKLEAELEKAATHRHS 942

  Fly   870 FKGKKNNYASSVSTWFQEDRIPKEHIQRVNDFVASTFGSEQLKYQSFCTKFDRHGYKSRDRFILL 934
            ::.|...|..:|     |:|:.|  :|:.|         .:|:.|             |:|    
Mouse   943 YEEKGRRYRDTV-----EERLSK--LQKHN---------AELELQ-------------RER---- 974

  Fly   935 SNKAIYVLDGKTYKQKHRLPLDKIDFTLTNHNDDLMVIRIPLDLKKDKGDLILIIPRIIEFSTYI 999
               |..:|..|:.:.|.:  :||:...|.:            |::|::... |::.:..|..|..
Mouse   975 ---AEQMLQEKSEELKEK--MDKLTRQLFD------------DVQKEEQQR-LVLEKGFELKTQA 1021

  Fly  1000 ----IDTVGTASIVSIVD-RNSLEHNVVKGK 1025
                |::: ...|.::.| |:.|.|.:.:|:
Mouse  1022 YEKQIESL-REEIKALKDERSQLHHQLEEGQ 1051

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myo61FNP_476934.2 MYSc_Myo1 52..707 CDD:276829 266/684 (39%)
Myosin_TH1 863..1049 CDD:461801 31/168 (18%)
Myo5cXP_006510998.1 MYSc_Myo5 81..741 CDD:276831 266/684 (39%)
IQ 831..851 CDD:459869 7/19 (37%)
SMC_prok_B <850..>1385 CDD:274008 46/262 (18%)
Myo5c_CBD 1376..1743 CDD:271260
Blue background indicates that the domain is not in the aligned region.

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