DRSC/TRiP Functional Genomics Resources

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Protein Alignment Myo61F and Myo16

DIOPT Version :10

Sequence 1:NP_476934.2 Gene:Myo61F / 38153 FlyBaseID:FBgn0010246 Length:1052 Species:Drosophila melanogaster
Sequence 2:XP_008769606.1 Gene:Myo16 / 192253 RGDID:621561 Length:1934 Species:Rattus norvegicus


Alignment Length:872 Identity:243/872 - (27%)
Similarity:403/872 - (46%) Gaps:127/872 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 SEEAFIGNLKKRFQEDLIYTYIGQVLISVNPYKQLPIYTDDHVKAY---RNKHFYEMPPHIFAVT 111
            ::.:.:..::|||..|.|:|:||.:.:.|||:|:||||:....:.|   ..:....:|||:|:..
  Rat   435 NDSSLLYEIQKRFGNDQIHTFIGDIFLLVNPFKELPIYSTVVSQMYLSPTGQRSPSLPPHLFSCA 499

  Fly   112 DNAFRSLIEENRGQCVLISGESGSGKTEASKKVLQFIAACSGNQTTVEGVKDKLLKSNPVLEAFG 176
            :.||..|.:|.|.|.:::|||.|||||:|||::::.:.:.:.:..|:  ...:...:..:|||||
  Rat   500 ERAFHRLFQERRPQNIILSGERGSGKTQASKQIMKHLTSRASSSCTM--FDSRFKHAICILEAFG 562

  Fly   177 NAKTNRNDNSSRFGKYMDIQFDFKGAPI-GGNILNYLLEKSRVVAQMGGERNFHIFYQLLAGADE 240
            :|||..|:.||...:|.::||..:...: |..|..|:|||.|:|||..|:.:|.||..|:.|...
  Rat   563 HAKTTLNNVSSCLIQYWELQFCQRRKHVTGARISTYMLEKPRLVAQPPGQGSFLIFSWLMDGLSA 627

  Fly   241 ALLQELRLERALDTYSYLTDGLN---GTVTRINDADSFKQVQQALTVIDFTKEEQREIFGIVASI 302
            .....|.|.. ...:.|::.|:.   .|..|..:.:....::.||.||.|:..|...:|.|:::|
  Rat   628 EEKCGLHLSN-FCAHRYVSQGMREDVSTAERSLNKERLADLKHALNVIGFSALEVENLFAILSAI 691

  Fly   303 LHLGNVGFTEV--EGNAKVNSRDLVVTAARLLGVNASELEAALTHRTIDARGDVVTSPLNQELAI 365
            ||:|::.||.:  ..:|.|:...|:...|.:|.|:..||.:|||......:|||:......::|.
  Rat   692 LHIGDIQFTALTEADSAFVSDLQLLEQVADMLQVSTDELASALTTDIQYFKGDVIIRRHTTQIAA 756

  Fly   366 YARDALAKAVYDRLFSWLVQRLNISLQAKETRASRNNV-MGILDIYGFEIFQKNSFEQFCINFCN 429
            :.||.|||::|.|||.:|:..:|..||:::...|...: :|||||:|||.||||.|||.|:|..|
  Rat   757 FYRDLLAKSLYSRLFGFLINTVNCCLQSQDEYKSLQTLDIGILDIFGFEEFQKNEFEQLCVNLTN 821

  Fly   430 EKLQQLFIELTLKSEQDEYRREGIEWIPVEYFDNKV-ICNLIEEKHKGIISILDEE--CLRPGEP 491
            ||:.....|:....||.|..:||:.........|:. :.:...:|..|..|:||||  .:...||
  Rat   822 EKMHHYIQEVLFLQEQTECVQEGVAMETACSPGNQAGVLDFFFQKPSGFFSLLDEESQAIWSVEP 886

  Fly   492 TDKTFLEKLTQKLAQHHHYVCHEKAPAHIKKIMLRDEFRLVHYAGEVTYSVNGFLDKNNDLLFRD 556
            .....|:.|.:....:..|...:....::........|.::||||.|||.:.|.:::|.|.|.::
  Rat   887 NLPRKLQGLLESSNTNAVYSPMKDGNGNVAFKGQGAAFTVMHYAGRVTYEIRGAVERNKDSLSQN 951

  Fly   557 LKETLSKAGNGIVRNCFPEK----------------------------------------ELRSL 581
            |...:..:.|.::.:.|..|                                        ||..|
  Rat   952 LLFVMKTSENVVISHLFQSKLSPTGSLISSYPSFKFGGHKSSLLSKRIASSMVGVNKNYLELSKL 1016

  Fly   582 KR---------------PETAITQFRASLNNLMDILMCKEPSYIRCIKPNDLQTANVFNDELVLH 631
            .:               |.|..:|...||.::...|....|.:|.|:|||..|...||:...|..
  Rat  1017 LKKKGTCTFLQRLERGDPATTASQLTKSLADITAKLQKGSPHFILCVKPNTSQLPGVFDHFYVSA 1081

  Fly   632 QVKYLGLMENLRVRRAGFAYRRTYELFLERYKSLSKSTWPNYKG-PGGPKAG-VQQLVKDLGWDE 694
            |::|||::..:|:.|.|:..|.::|.||.||:.|:.......|| |...:.. |.|..|..||  
  Rat  1082 QLQYLGVLGLVRLFRYGYPVRPSFEDFLSRYEPLASVLLGEKKGQPAEERCRLVLQRCKLQGW-- 1144

  Fly   695 EKYRVGETKLFIRWPRTLFDTEDAYQEKKHEIAAIIQAHWKGLMQRRKYLKLRAQVIIMQSYCRR 759
               ::|..|:|::                         :|:.......:|:::.:::..|...|.
  Rat  1145 ---QMGVHKVFLK-------------------------YWQVDQLGDLWLQMQRKIVTCQKVIRG 1181

  Fly   760 KLAQQAAKKRREAADKIRAFIKGFI--TRNDAPNGFNEEFIANAKRMWLL--RLAKELPTKVLDK 820
            .||:|...:|.....:....||.|:  |.:.|...::...|.||..:...  ||.||:       
  Rat  1182 FLARQHLLQRMSIKQQEVTSIKSFLQSTEDMALKTYDALVIQNASDIAREHDRLRKEV------- 1239

  Fly   821 SWPHAPGH----------CEEASGILH 837
               ||..|          .|:..|..|
  Rat  1240 ---HAAYHRNRQEEGTKRAEDQGGCRH 1263

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myo61FNP_476934.2 MYSc_Myo1 52..707 CDD:276829 217/724 (30%)
Myosin_TH1 863..1049 CDD:461801
Myo16XP_008769606.1 ANKYR 81..332 CDD:440430
ANK repeat 114..145 CDD:293786
ANK repeat 147..178 CDD:293786
ANK repeat 180..210 CDD:293786
ANK repeat 243..274 CDD:293786
ANK repeat 276..307 CDD:293786
MYSc_Myo16 437..1154 CDD:276844 217/724 (30%)
NYAP_N 1236..1603 CDD:464717 8/38 (21%)
Blue background indicates that the domain is not in the aligned region.

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