DRSC/TRiP Functional Genomics Resources

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Protein Alignment Myo61F and myo-2

DIOPT Version :9

Sequence 1:NP_476934.2 Gene:Myo61F / 38153 FlyBaseID:FBgn0010246 Length:1052 Species:Drosophila melanogaster
Sequence 2:NP_510092.2 Gene:myo-2 / 181404 WormBaseID:WBGene00003514 Length:1947 Species:Caenorhabditis elegans


Alignment Length:1063 Identity:318/1063 - (29%)
Similarity:511/1063 - (48%) Gaps:188/1063 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 YQSEEAFIGNLKKRFQEDLIYTYIGQVLISVNPYKQLPIYTDDHVKAYRNKHFYEMPPHIFAVTD 112
            :.::.:.:.|||.|:...|||||.|...:.:||||:||||||...:.:..|...|||||:|||:|
 Worm    91 FLNDASVLYNLKARYAAMLIYTYSGLFCVVINPYKRLPIYTDSVARMFMGKRRTEMPPHLFAVSD 155

  Fly   113 NAFRSLIEENRGQCVLISGESGSGKTEASKKVLQFIAACSGNQTTVEGVK--------------- 162
            .|:|::::.:..|.:||:||||:||||.:|||:.:.||....|....|.|               
 Worm   156 EAYRNMLQNHENQSMLITGESGAGKTENTKKVISYFAAVGAAQQETFGAKKAATEEDKNKKKVTL 220

  Fly   163 -DKLLKSNPVLEAFGNAKTNRNDNSSRFGKYMDIQFDFKGAPIGGNILNYLLEKSRVVAQMGGER 226
             |:::::||||||||||||.||:|||||||::.|.|..:|.....:|.:||||||||:.|..|||
 Worm   221 EDQIVQTNPVLEAFGNAKTVRNNNSSRFGKFIRIHFSKQGRVASCDIEHYLLEKSRVIRQAPGER 285

  Fly   227 NFHIFYQLLAGADEALLQELRLERALDTYSYLTDG---LNGTVTRINDADSFKQVQQALTVIDFT 288
            .:|||||:.:.....|.::|.|.:.:..|.::...   ::|    |||.:..:...:|..::.||
 Worm   286 CYHIFYQVFSDYLPNLKKDLLLNKPVKDYWFIAQAELIIDG----INDKEEHQLTDEAFDILKFT 346

  Fly   289 KEEQREIFGIVASILHLGNVGFTE--VEGNAKVNSRDLVVTAARLLGVNASELEAALTHRTIDAR 351
            ..|:.|.:.:||:::|:||:.|.:  .|..|:.:..|....||:..|:::.|...|||...:...
 Worm   347 PTEKMECYRLVAAMMHMGNMKFKQRPREEQAEPDGTDDAERAAKCFGIDSEEFLKALTRPRVKVG 411

  Fly   352 GDVVTSPLNQELAIYARDALAKAVYDRLFSWLVQRLNISLQAKETRASRNNVMGILDIYGFEIFQ 416
            .:.|....|.|...:|..|:||.:|.|:|:|||::.|.:|..|  ..||::.:|:|||.|||||.
 Worm   412 NEWVNKGQNIEQVNWAVGAMAKGLYSRIFNWLVKKCNQTLDQK--GISRDHFIGVLDIAGFEIFD 474

  Fly   417 KNSFEQFCINFCNEKLQQLFIELTLKSEQDEYRREGIEWIPVEYFDNKVICNLIEEKHKGIISIL 481
            .|||||..|||.||||||.|.......||:||.||||:|..:::..:...|..:.||..|||::|
 Worm   475 FNSFEQLWINFVNEKLQQFFNHHMFVLEQEEYAREGIQWTFIDFGLDLQACIELIEKPLGIIAML 539

  Fly   482 DEECLRPGEPTDKTFLEKL-TQKLAQHHHYVCHEKAPAHIKKIMLRDEFRLVHYAGEVTYSVNGF 545
            ||||:.| :.||.|..:|| .|.|.:|.::   || |...|.......|.:.||||.|.|:...:
 Worm   540 DEECIVP-KATDLTLAQKLIDQHLGKHPNF---EK-PKPPKGKQAEAHFAMRHYAGTVRYNCLNW 599

  Fly   546 LDKNNDLLFRDLKETLSKAGN------GIVRNCFPEKELRSLKRPETAITQ-------------- 590
            |:||.|.| .|...|:.||..      .:.::...::|..:.....||..:              
 Worm   600 LEKNKDPL-NDTVVTVMKASKEHALIVEVWQDYTTQEEAAAAAAKGTAGAKKKGKSGSFMTVSML 663

  Fly   591 FRASLNNLMDILMCKEPSYIRCIKPNDLQTANVFNDELVLHQVKYLGLMENLRVRRAGFAYRRTY 655
            :|.|||.||.:|....|.:||||.||:.:.:.|.:..|||:|:...|::|.:|:.|.||..|..:
 Worm   664 YRESLNKLMTMLHSTHPHFIRCIIPNEKKASGVIDAGLVLNQLTCNGVLEGIRICRKGFPNRTLH 728

  Fly   656 ELFLERYKSLSKSTWPNYKGPGGPKAG----VQQLVKDLGWDEEKYRVGETKLF----------- 705
            ..|::||..|:..  .:..|....|.|    :.:|||:...:||.:|||.||:|           
 Worm   729 PDFVQRYALLAAD--ESIIGKTDAKKGSALMLARLVKEKKLEEENFRVGLTKVFFKAGIVAHLED 791

  Fly   706 ----------------IRWPRTLFDTEDAYQ--EKKHEI-----AAIIQAHWKGLMQRRKYL--- 744
                            |||         .||  |:|..:     ..|||.:.:...:.|.::   
 Worm   792 LRDQSLAQLITGLQAQIRW---------YYQTIERKRRVEKITALKIIQRNIRSWAELRTWVWFK 847

  Fly   745 ------------KLRAQVIIMQ---SYCRRKLAQQAAKKR--REAADKIRAFIKGFITRNDAPNG 792
                        |:.||...:|   :..:..:.|:..|||  :|.|:::.......:.:.:|..|
 Worm   848 LYGKVKPLVNSGKIEAQYEKLQETVATLKDTVVQEEEKKRQLQEGAERLNKETADLLAQLEASKG 912

  Fly   793 -----------FNEEFIANAKRMWLLRLAKELPT------------KVLDKSWPHAPGHCEEASG 834
                       .||:.:|...:  |...:|:|..            |:::........:|::...
 Worm   913 STREVEERMTAMNEQKVALEGK--LADASKKLEVEEARAVEINKQKKLVEAECADLKKNCQDVDL 975

  Fly   835 ILHRLHRLHLARIYRLKLTPQQKRQFELKVLAEKVFKGKKNNYASSVSTWFQEDRIPK--EHIQR 897
            .|.::.....|:.::::....:.||.:..:  .|:.|.:||          ||::..|  |.:|.
 Worm   976 SLRKVEAEKNAKEHQIRALQDEMRQQDENI--SKLNKERKN----------QEEQNKKLTEDLQA 1028

  Fly   898 VNDFVASTFGSEQLKYQSFCTKFDRHGYKSRDRFILLSNKAIYVLDGKTYKQKHRLPLDKIDFTL 962
            ..:   ....:.:||.:...:..|......|::                   ::|..:||   ..
 Worm  1029 AEE---QNLAANKLKAKLMQSLEDSEQTMEREK-------------------RNRADMDK---NK 1068

  Fly   963 TNHNDDLMVIRIPL-DLKKDKGD 984
            .....:|.:.:..| :|.|.|.|
 Worm  1069 RKAEGELKIAQETLEELNKSKSD 1091

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myo61FNP_476934.2 MYSc 32..720 CDD:214580 264/744 (35%)
MYSc_Myo1 52..707 CDD:276829 261/727 (36%)
Myosin_TH1 863..1035 CDD:283635 22/125 (18%)
myo-2NP_510092.2 Myosin_N 31..68 CDD:280832
Myosin_head 83..782 CDD:278492 261/704 (37%)
MYSc_class_II 95..782 CDD:276951 261/700 (37%)
Myosin_tail_1 876..1939 CDD:279860 42/255 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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