DRSC/TRiP Functional Genomics Resources

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Protein Alignment Myo61F and hum-6

DIOPT Version :9

Sequence 1:NP_476934.2 Gene:Myo61F / 38153 FlyBaseID:FBgn0010246 Length:1052 Species:Drosophila melanogaster
Sequence 2:NP_508420.1 Gene:hum-6 / 180539 WormBaseID:WBGene00002039 Length:2098 Species:Caenorhabditis elegans


Alignment Length:802 Identity:302/802 - (37%)
Similarity:450/802 - (56%) Gaps:81/802 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 LHERDRAGVQDFVLLENYQSEEAFIGNLKKRFQEDLIYTYIGQVLISVNPYKQLPIYTDDHVKAY 95
            :|.....||:|...|.::. |.|.:.||..|::|.|||.|.|.:||:||||..:.|||.|.::.|
 Worm    56 MHPTSVQGVEDMCQLGDFH-ESAILRNLFIRYREKLIYAYTGSILIAVNPYMDIAIYTADEIRMY 119

  Fly    96 RNKHFYEMPPHIFAVTDNAFRSLIEENRGQCVLISGESGSGKTEASKKVLQFIAACSGNQTTVEG 160
            :.|...|:||||||:.|||:.::..|.:.|.|:||||||:||||::|.||||:|..||..:.:| 
 Worm   120 KRKRIGELPPHIFAIADNAYTNMRREKKNQSVIISGESGAGKTESTKLVLQFLATISGQHSWIE- 183

  Fly   161 VKDKLLKSNPVLEAFGNAKTNRNDNSSRFGKYMDIQFDFKGAPIGGNILNYLLEKSRVVAQMGGE 225
              .::|::||||||||||||.|||||||||||:|:.|:..|:..|..|..|||||||:|.|...|
 Worm   184 --QQVLEANPVLEAFGNAKTIRNDNSSRFGKYIDVHFNESGSIEGAKIEQYLLEKSRIVTQSENE 246

  Fly   226 RNFHIFYQLLAGADEALLQELRLERALDTYSYLTDGLNGTVTRINDADSFKQVQQALTVIDFTKE 290
            ||:||||.||||.......||.|..|.| |.||..|...|....:||....:::.|:.|:...::
 Worm   247 RNYHIFYCLLAGLSREEKSELELGTAAD-YYYLIQGKTLTAEGRDDAADLAEIRSAMRVLMINEQ 310

  Fly   291 EQREIFGIVASILHLGNVGFTEVEGNAKVNSRDL-----VVTAARLLGVNASELEAALTHRTIDA 350
            |...||.::||:||:||:.|.: ..|..:.|.|:     :|..|:||.::...|..|:|.:::..
 Worm   311 EIGSIFKLLASLLHIGNIRFRQ-NTNDNMESVDVADPSTLVRIAKLLQLHEQNLLDAITTKSLVT 374

  Fly   351 RGDVVTSPLNQELAIYARDALAKAVYDRLFSWLVQRLNISLQAKETRASRNNVMGILDIYGFEIF 415
            |.:.|.|.||.:.|:.||||||||:|.:||..:|:|:|.::.  :...||...:|||||:|||.|
 Worm   375 REERVISRLNGQQAVDARDALAKAIYGKLFIHIVRRVNDAIY--KPSQSRRTSIGILDIFGFENF 437

  Fly   416 QKNSFEQFCINFCNEKLQQLFIELTLKSEQDEYRREGIEWIPVEYFDNKVICNLIEEKHKGIISI 480
            :.|||||.||||.||.|||.|:....|.||.||..|.|.|..:::.||:...:||.::...|:|:
 Worm   438 ESNSFEQLCINFANETLQQFFVHHVFKMEQKEYDEEHINWRHIKFVDNQATVDLIAQRPLNILSL 502

  Fly   481 LDEECLRPGEPTDKTFLEKLTQKLAQHHHYVCHEKAPAHIK-KIMLRDEFRLVHYAGEVTYSVNG 544
            :|||.:.| :.||||.|.||         :..|.:...::: |..|:..|.:.|:||.|.|:..|
 Worm   503 IDEESIFP-KGTDKTMLLKL---------HSTHGRNELYLQPKSELQRAFGVTHFAGNVFYNTRG 557

  Fly   545 FLDKNNDLLFRDLKETLSKAGNGIVRNCFPEKELRSLKRPETAI-TQFRASLNNLMDILMCKEPS 608
            ||:||.|....||...:|.:....:...|.:.|..:..|.:..: .|||.||..||..|....|.
 Worm   558 FLEKNRDSFSADLSVLISSSKMPFLARLFDDIEYDTSSRKKVTVGNQFRRSLEQLMSQLTQTHPF 622

  Fly   609 YIRCIKPNDLQTANVFNDELVLHQVKYLGLMENLRVRRAGFAYRRTYELFLERYKSLSKSTWPNY 673
            :|||||||:::.|.|.:.:|||.|::|.|:||.:::||:|:..|..|..|:.||:.|..|    .
 Worm   623 FIRCIKPNEMKRALVMDRDLVLRQLRYSGMMETIKIRRSGYPIRHDYYPFVFRYRVLVSS----I 683

  Fly   674 KGPGGPKAGVQQLVKD-----LGWDEEKYRVGETKLFIRWPRTLFDTEDAYQ------------- 720
            :||.. :..:....|.     ||.:.: |::|:||:|::....|...::.|:             
 Worm   684 QGPVN-RIDLHDAAKKICHMILGTNAD-YQLGKTKVFLKDKHDLVLEQEYYRILKDKAIVIQKNV 746

  Fly   721 ---------EKKHEIAAIIQAHWKGLMQRRKYLK-----------------------LRAQVIIM 753
                     ||:.:.|..||..|:|..||::|.:                       ||..:|..
 Worm   747 RRWLVRKDFEKQRQAAVTIQTAWRGFDQRKRYRQIISGFSRLQAVLRSRQLVSHYQTLRKTIIQF 811

  Fly   754 QSYCRRKLAQQAAKKRREAADK 775
            |:.||..|.::...::|:..:|
 Worm   812 QAVCRGSLVRRQVGEKRKRGEK 833

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myo61FNP_476934.2 MYSc 32..720 CDD:214580 282/699 (40%)
MYSc_Myo1 52..707 CDD:276829 275/666 (41%)
Myosin_TH1 863..1035 CDD:283635
hum-6NP_508420.1 MYSc 57..731 CDD:214580 282/697 (40%)
MYSc_Myo7 76..720 CDD:276832 275/666 (41%)
IQ 757..779 CDD:197470 8/21 (38%)
MyTH4 929..1168 CDD:214535
B41 1174..1388 CDD:214604
FERM_B-lobe 1278..1378 CDD:271216
FERM_C1_MyoVII 1382..1480 CDD:270019
SH3 1481..1544 CDD:302595
MyTH4 1624..1772 CDD:214535
B41 1779..1993 CDD:214604
FERM_B-lobe 1890..1985 CDD:271216
FERM_C2_MyoVII 1989..2087 CDD:270020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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