DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Myo61F and myo1f

DIOPT Version :9

Sequence 1:NP_476934.2 Gene:Myo61F / 38153 FlyBaseID:FBgn0010246 Length:1052 Species:Drosophila melanogaster
Sequence 2:XP_002938604.1 Gene:myo1f / 100493342 XenbaseID:XB-GENE-5909751 Length:1095 Species:Xenopus tropicalis


Alignment Length:906 Identity:371/906 - (40%)
Similarity:527/906 - (58%) Gaps:105/906 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 MDTKDYIDFNSQLKMETGLHERDRAGVQDFVLLENYQSEEAFIGNLKKRFQEDLIYTYIGQVLIS 77
            |.:|:...:.||        ...::||.|.|||... :|:|.:.|||||:.:|.|:||||.||||
 Frog     1 MGSKERYHWQSQ--------NVKQSGVDDMVLLSKI-TEDAIVENLKKRYLDDYIFTYIGSVLIS 56

  Fly    78 VNPYKQLPIYTDDHVKAYRNKHFYEMPPHIFAVTDNAFRSLIEENRGQCVLISGESGSGKTEASK 142
            |||:||:|.:|:..::.|:....||.||||:|:|||.:|:::.:...|||:||||||:|||.|:|
 Frog    57 VNPFKQMPYFTEREIELYQGAAQYENPPHIYALTDNMYRNMLIDGENQCVIISGESGAGKTVAAK 121

  Fly   143 KVLQFIAACSGNQTTVEGVKDKLLKSNPVLEAFGNAKTNRNDNSSRFGKYMDIQFDFKGAPIGGN 207
            .::.:|:..||..:.|:.|||.:|:|||:|||||||||.||:||||||||.:|||...|.|.||.
 Frog   122 YIMGYISKVSGGGSKVQHVKDIILQSNPLLEAFGNAKTVRNNNSSRFGKYFEIQFSRGGEPDGGK 186

  Fly   208 ILNYLLEKSRVVAQMGGERNFHIFYQLLAGADEALLQELRLERALDTYSYLTDGLNGTVTRINDA 272
            |.|:||||||||:|...|||||:||||:.||.:...|.|.: ...|.:.||.......|...||.
 Frog   187 ISNFLLEKSRVVSQNENERNFHVFYQLIEGASDEQRQNLGI-MTPDYFFYLNQSETYKVEGTNDK 250

  Fly   273 DSFKQVQQALTVIDFTKEEQREIFGIVASILHLGNVGFTEVEGNAKVNSRDLVVTAARLLGVNAS 337
            ..|.::.:|:.||..:.|||:.:..|.|.||||||:.|.|....|||...||:...|.||||...
 Frog   251 KDFYEMLEAMMVIGVSAEEQQMVLQISAGILHLGNISFQEQGNYAKVECPDLLDFPAYLLGVQKG 315

  Fly   338 ELEAALTHRTIDA----RGDVVTSPLNQELAIYARDALAKAVYDRLFSWLVQRLNISLQAKETRA 398
            .|...||.|.:|:    |.:.:|..||.|.|.|.||||:||:|.|:|.:||:.:|.::|......
 Frog   316 RLNDKLTSRKMDSKWGGRSESITVTLNVEQASYTRDALSKALYARVFDFLVESINKAMQKPYEEY 380

  Fly   399 SRNNVMGILDIYGFEIFQKNSFEQFCINFCNEKLQQLFIELTLKSEQDEYRREGIEWIPVEYFDN 463
            |    :|:||||||||||||.||||||||.||||||:|||||||:||:||..|||.|.|:|||:|
 Frog   381 S----IGVLDIYGFEIFQKNGFEQFCINFVNEKLQQIFIELTLKAEQEEYVAEGIRWTPIEYFNN 441

  Fly   464 KVICNLIEEK--HKGIISILDEECL---RPGEPTDKTFLEKLTQKLAQHHH-------YVCHEKA 516
            |::|:|||.|  ..||:|:||:.|.   ..|...|:|.|:||...:..|.|       :|.|   
 Frog   442 KIVCDLIENKLNPPGIMSVLDDVCATMHATGGGADQTLLQKLQAAVGTHEHFSNWNLGFVIH--- 503

  Fly   517 PAHIKKIMLRDEFRLVHYAGEVTYSVNGFLDKNNDLLFRDLKETLSKAGNGIVRNCFPEKELRSL 581
                            ||||:|:|.|.||.::|.|:||.||.|.:..:....:::.|||: |.|.
 Frog   504 ----------------HYAGKVSYYVEGFCERNRDVLFIDLIELMQSSEYQFIQSLFPER-LDSD 551

  Fly   582 K--RPETAITQFRASLNNLMDILMCKEPSYIRCIKPNDLQTANVFNDELVLHQVKYLGLMENLRV 644
            |  ||.||.::.:...|:|::.||...|.||||||||:.:....:.:..|.|||:||||.||:||
 Frog   552 KKSRPTTAGSKIKKQANDLVNTLMKCTPHYIRCIKPNETKKPKDWEESRVKHQVEYLGLKENIRV 616

  Fly   645 RRAGFAYRRTYELFLERYKSLSKSTWPNYKGPGGPKAGVQQLVKDLGWDEEKYRVGETKLFIRWP 709
            |||||||||.:..||:||..|::.|||.::  |..:.|||.|::.:..|.::|::|::|:|::.|
 Frog   617 RRAGFAYRRVFNKFLQRYAILTQETWPRWR--GDERQGVQHLLRSVNMDSDQYQMGKSKVFVKNP 679

  Fly   710 RTLFDTEDAYQEKKHEIAAIIQAHWKGLMQRRKYLKLRAQVI-IMQSYCRRK------------- 760
            .:||..|:..:.|....|..||..|:..:.||||.::|.:.. |:..|..|:             
 Frog   680 ESLFLLEEMRERKFDTFARTIQKAWRRYIARRKYEQMREEASNILYGYKERRRNSINRNFVGDYL 744

  Fly   761 -------LAQQAAKKRR-EAADKIRAFIKGFITRNDAPNGFNEEFIANAKRMWLL--RLAKELPT 815
                   |.|...|:.| :.||.:..:.:.|       .....:.|.:.|.::|:  ...|:.|.
 Frog   745 GMEDRPELRQFMTKRERIDFADSVSKYDRRF-------KSIKRDLILSPKYLYLIGREKVKKGPE 802

  Fly   816 KVLDKSWPHAPGHCEEASGILHRLHRLHLARIYRLKLTPQQKRQFELK-----VLAEKVFK 871
            |          |..:|   ||.:  ::.:..|..:.|:.:|...|.|:     .|.|.|||
 Frog   803 K----------GQIKE---ILKK--KVEIMNIQSISLSTRQDDFFILQEVDHDTLMESVFK 848

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myo61FNP_476934.2 MYSc 32..720 CDD:214580 327/705 (46%)
MYSc_Myo1 52..707 CDD:276829 316/672 (47%)
Myosin_TH1 863..1035 CDD:283635 5/14 (36%)
myo1fXP_002938604.1 MYSc_Myo1 31..677 CDD:276829 316/672 (47%)
Myosin_TH1 717..915 CDD:368706 31/154 (20%)
PHA03378 <958..>1041 CDD:223065
SH3_MyoIe_If_like 1042..1094 CDD:212761
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D122881at2759
OrthoFinder 1 1.000 - - FOG0000187
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.920

Return to query results.
Submit another query.