Sequence 1: | NP_001261249.1 | Gene: | Herc4 / 38151 | FlyBaseID: | FBgn0035207 | Length: | 1062 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_055486.2 | Gene: | UBE3C / 9690 | HGNCID: | 16803 | Length: | 1083 | Species: | Homo sapiens |
Alignment Length: | 954 | Identity: | 215/954 - (22%) |
---|---|---|---|
Similarity: | 353/954 - (37%) | Gaps: | 292/954 - (30%) |
- Green bases have known domain annotations that are detailed below.
Fly 278 TCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNR--------HTLALVPSR-------- 326
Fly 327 ----------GRVYAFGLGSSGQLGTRSTKSLMLPQVVIGPWVSPSGSALLQSNDSQVSLVIRQI 381
Fly 382 FSGGDQSIVTTTLFVDK-VPPEDFRNYNPKSQILTLTAEVTKQCAQ---CKQGLQSDMDLL---S 439
Fly 440 SIELIFRSQACWNGSFLLDHDRHFGCSVRNHGLDLKAAQLAFDNLRAVENESIRQVIWDNI---- 500
Fly 501 TKELVGSLV--------CSPADVE-SMRLYLLLPLYHEFVNSKHYKSLQVPFANAIFKLAENPRK 556
Fly 557 VLNKWLAQTPAEYFEHLVQNFLHVVIHIISFKMGLAAASPSAERRQQLLPYNTELEIIL-KLMKT 620
Fly 621 LCQINNERHDRLNYQIFYWPDLSDYADVQQEYV-----------------------KWIM----- 657
Fly 658 ---------ADTARDFNICNYSFIFDQSAKTALLQADQALQMHSAMANAATMAFSFFNYGM---- 709
Fly 710 -----------PIS-------------QFIV-----------------------------LNVT- 720
Fly 721 -RENLVQDSLRELQHYSQSDLKKPLKIKF---HG--EEAEDAGGVRKEFFMLLLKDLLDPKYGMF 779
Fly 780 KEYEQSRLLW------------FADLTFETENMYFLIGVLCGLAIYNFTIINLPFPLALFKKLLG 832
Fly 833 --KPVDLSDLRQLSPPEANSMQSLLDYQGDDFKEVFDLTFEISRDVFGEAETKCLKPNGNEIAVT 895
Fly 896 LENRQEFVDLYVDFVFNKSVELHYNAFHKGFMKVCSGRVIHIFQPEELMAVVVGNE-DYDWQALQ 959
Fly 960 DNCEYREGYTSVDDTIKWFWEVIHDMSEAEKKSFLLFLTGSDRIPIQGMKALKLTIQPT------ 1018
Fly 1019 -PDERFLPVAHTCFNLLDLPRYKTKERLKYKLLQAIQQTQGFSL 1061 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Herc4 | NP_001261249.1 | RCC1 | 6..55 | CDD:278826 | |
RCC1 | 59..110 | CDD:278826 | |||
RCC1 | 114..163 | CDD:278826 | |||
RCC1 | 167..218 | CDD:278826 | |||
RCC1 | 221..270 | CDD:278826 | |||
RCC1 | 273..322 | CDD:278826 | 8/51 (16%) | ||
RCC1_2 | 309..339 | CDD:290274 | 9/55 (16%) | ||
RCC1 | 327..390 | CDD:278826 | 13/62 (21%) | ||
HECTc | 715..1060 | CDD:238033 | 115/402 (29%) | ||
HECTc | 739..1059 | CDD:214523 | 107/346 (31%) | ||
UBE3C | NP_055486.2 | Cis-determinant of acceptor ubiquitin-binding | 1..60 | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..40 | ||||
IQ | 47..64 | CDD:197470 | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 355..385 | 11/49 (22%) | |||
HECTc | 725..1081 | CDD:238033 | 113/369 (31%) | ||
HECTc | 747..1080 | CDD:214523 | 107/346 (31%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5021 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |