| Sequence 1: | NP_001261249.1 | Gene: | Herc4 / 38151 | FlyBaseID: | FBgn0035207 | Length: | 1062 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_291050.1 | Gene: | Rcc1l / 94254 | MGIID: | 2137600 | Length: | 461 | Species: | Mus musculus |
| Alignment Length: | 400 | Identity: | 125/400 - (31%) |
|---|---|---|---|
| Similarity: | 173/400 - (43%) | Gaps: | 56/400 - (14%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 2 ASGKELYCWGSTSHGQLGL-------------GGIEDEQILTPSQIPWTPDTAVQQVACGHRHTL 53
Fly 54 FLTAT---GKVYACGSNDYSQLG-HDLPTKRPRMSPFLLIP--------ELQDYVIIQICCGSRH 106
Fly 107 SLALSDWGQVLSWGDNDCGQLGH--ATDKEIVQLPKVVR-QLVTKTVVQIACGNNHSLALTSCGE 168
Fly 169 LYS--WGSNIYGQLGVNSPNDLTHCNY---PLRL-TTLLGIPLAAIACGGNHSFLISKSGAVFGW 227
Fly 228 GRNNCGQL-GLNDETNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGF 291
Fly 292 SSNE-MLPRMV-MELMGST-------ITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKS 347
Fly 348 LMLPQVVIGP 357 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Herc4 | NP_001261249.1 | RCC1 | 6..55 | CDD:278826 | 13/61 (21%) |
| RCC1 | 59..110 | CDD:278826 | 19/59 (32%) | ||
| RCC1 | 114..163 | CDD:278826 | 20/51 (39%) | ||
| RCC1 | 167..218 | CDD:278826 | 18/56 (32%) | ||
| RCC1 | 221..270 | CDD:278826 | 17/49 (35%) | ||
| RCC1 | 273..322 | CDD:278826 | 20/57 (35%) | ||
| RCC1_2 | 309..339 | CDD:290274 | 8/29 (28%) | ||
| RCC1 | 327..390 | CDD:278826 | 7/30 (23%) | ||
| HECTc | 715..1060 | CDD:238033 | |||
| HECTc | 739..1059 | CDD:214523 | |||
| Rcc1l | NP_291050.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..35 | ||
| RCC1 1. /evidence=ECO:0000255 | 55..121 | 13/65 (20%) | |||
| RCC1 2. /evidence=ECO:0000255 | 125..188 | 20/62 (32%) | |||
| RCC1 | 127..186 | CDD:278826 | 19/58 (33%) | ||
| RCC1_2 | 173..202 | CDD:290274 | 12/28 (43%) | ||
| RCC1 3. /evidence=ECO:0000255 | 190..244 | 21/53 (40%) | |||
| RCC1 | 192..242 | CDD:278826 | 20/49 (41%) | ||
| RCC1_2 | 229..258 | CDD:290274 | 16/30 (53%) | ||
| RCC1 4. /evidence=ECO:0000255 | 245..297 | 18/59 (31%) | |||
| RCC1 | 245..295 | CDD:278826 | 18/57 (32%) | ||
| RCC1 5. /evidence=ECO:0000255 | 298..350 | 18/51 (35%) | |||
| RCC1 | 298..348 | CDD:278826 | 17/49 (35%) | ||
| RCC1 6. /evidence=ECO:0000255 | 352..408 | 21/59 (36%) | |||
| RCC1_2 | 393..422 | CDD:290274 | 8/29 (28%) | ||
| RCC1 7. /evidence=ECO:0000255 | 409..458 | 7/31 (23%) | |||
| RCC1 | 409..452 | CDD:278826 | 7/31 (23%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 1 | 1.010 | - | - | D1062377at2759 | |
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 3 | 2.920 | |||||